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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8080190   39S ribosomal protein L41-A, mitochondrial 
 zma-u.5   100278608   Mitochondrial ribosomal protein L27 
 zma-u.5   100278182   Mitochondrial ribosomal protein L27 
 osa-u.5   4329997   uncharacterized LOC4329997 
 ath-u.5   AT5G39800   Mitochondrial ribosomal protein L27 
 ath-u.5   AT5G40080   Mitochondrial ribosomal protein L27 
 gma-u.5   100790957   39S ribosomal protein L41-A, mitochondrial-like 
 gma-u.5   100306274   uncharacterized LOC100306274 
 sly-u.5   101264817   uncharacterized LOC101264817 
 vvi-u.5   100250642   39S ribosomal protein L41-A, mitochondrial-like 
 ppo-u.5   7474705   uncharacterized LOC7474705 
 mtr-u.5   11426659   39S ribosomal protein L41-A, mitochondrial 

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Top 50 coexpressed genes to 8080190 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8080190 (sbi-r.1 coexpression data)

CoexMap"8080190"


sbiLOC8080190 | Entrez gene ID : 8080190      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (19 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002466142.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto_nucl 2,  mito 1  (predict for XP_002466142.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002466142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8080190

.
zma-u.5
for
100278608

.
zma-u.5
for
100278182

.
osa-u.5
for
4329997

.
ath-u.5
for
AT5G39800

.
ath-u.5
for
AT5G40080

.
gma-u.5
for
100790957

.
gma-u.5
for
100306274

.
sly-u.5
for
101264817

.
vvi-u.5
for
100250642

.
ppo-u.5
for
7474705

.
mtr-u.5
for
11426659

.


Ortholog ID: 6986
Species ath ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol AT5G39800 AT5G40080 LOC100306274 LOC100790957 LOC101264817 LOC4329997 LOC100278608 LOC100278182 LOC103858504 LOC103838826 LOC100250642 LOC7474705 LOC11426659 LOC123144841 LOC123137483 LOC123406002 LOC121230340 LOC121218228 LOC111212569 LOC106435665 LOC8071485 LOC8080190 LOC102586898 LOC102610703 LOC100830849 LOC107768882 LOC107792763
Function* Mitochondrial ribosomal protein L27 Mitochondrial ribosomal protein L27 uncharacterized LOC100306274 39S ribosomal protein L41-A, mitochondrial-like uncharacterized LOC101264817 uncharacterized LOC4329997 Mitochondrial ribosomal protein L27 Mitochondrial ribosomal protein L27 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial-like uncharacterized LOC7474705 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial-like 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial uncharacterized LOC8071485 39S ribosomal protein L41-A, mitochondrial 39S ribosomal protein L41-A, mitochondrial uncharacterized LOC102610703 39S ribosomal protein L41-A, mitochondrial uncharacterized LOC107768882 uncharacterized LOC107792763
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00340 Histidine metabolism 2
ath00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00340 Histidine metabolism 2
ath00350 Tyrosine metabolism 2
ath00360 Phenylalanine metabolism 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03008 Ribosome biogenesis in eukaryotes 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi03040 Spliceosome 2
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit01240 Biosynthesis of cofactors 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03010 Ribosome 3
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta04120 Ubiquitin mediated proteolysis 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833976 834005 100306274 100790957 101264817 4329997 100278608 100278182 103858504 103838826 100250642 7474705 11426659 123144841 123137483 123406002 121230340 121218228 111212569 106435665 8071485 8080190 102586898 102610703 100830849 107768882 107792763
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