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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085258   pentatricopeptide repeat-containing protein At3g13160, mitochondrial 
 zma-u.5   103636586   pentatricopeptide repeat-containing protein At1g55890, mitochondrial 
 osa-u.5   4327045   small ribosomal subunit protein mS78 (rPPR3a) 

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Top 50 coexpressed genes to 8085258 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085258 (sbi-r.1 coexpression data)

CoexMap"8085258"


sbiLOC8085258 | Entrez gene ID : 8085258    
Species sbi zma osa sly bna ghi gma nta mtr cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021308882.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 1,  chlo 1,  nucl 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_021308882.1)
Subcellular
localization
TargetP
other 5  (predict for XP_021308882.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085258

.
zma-u.5
for
103636586

.
osa-u.5
for
4327045

.


Ortholog ID: 12511
Species osa zma tae tae hvu hvu sbi bdi bdi
Symbol LOC4327045 LOC103636586 LOC123062272 LOC123062273 LOC123444591 LOC123444594 LOC8085258 LOC100823565 LOC100822634
Function* small ribosomal subunit protein mS78 (rPPR3a) pentatricopeptide repeat-containing protein At1g55890, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00230 Purine metabolism 2
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4327045 103636586 123062272 123062273 123444591 123444594 8085258 100823565 100822634
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