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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4327045   small ribosomal subunit protein mS78 (rPPR3a) 
 osa-r.6   4327045   small ribosomal subunit protein mS78 (rPPR3a) 
 osa-m.8   4327045   small ribosomal subunit protein mS78 (rPPR3a) 
 osa-e.1   4327045   small ribosomal subunit protein mS78 (rPPR3a) 
 zma-u.5   103636586   pentatricopeptide repeat-containing protein At1g55890, mitochondrial 

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Top 50 coexpressed genes to 4327045 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4327045 (osa-u.5 coexpression data)

CoexMap"4327045"


osaLOC4327045 | Entrez gene ID : 4327045      
Species osa zma tae mtr bdi vvi sbi ppo bna sly nta cre sot hvu ath ghi gma cit bra
Paralog 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (13 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (14 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (655 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015622164.1 [sequence] [blastp]
XP_015622165.1 [sequence] [blastp]
XP_015622166.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_015622164.1)
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_015622165.1)
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_015622166.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_015622164.1)
chlo 7,  mito 3  (predict for XP_015622165.1)
chlo 7,  mito 3  (predict for XP_015622166.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4327045

.
osa-r.6
for
4327045

.
osa-m.8
for
4327045

.
osa-e.1
for
4327045

.
zma-u.5
for
103636586

.


Ortholog ID: 12511
Species osa zma tae tae hvu hvu sbi bdi bdi
Symbol LOC4327045 LOC103636586 LOC123062272 LOC123062273 LOC123444591 LOC123444594 LOC8085258 LOC100823565 LOC100822634
Function* small ribosomal subunit protein mS78 (rPPR3a) pentatricopeptide repeat-containing protein At1g55890, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At3g13160, mitochondrial pentatricopeptide repeat-containing protein At1g55890, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00230 Purine metabolism 2
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4327045 103636586 123062272 123062273 123444591 123444594 8085258 100823565 100822634
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