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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085697   pentatricopeptide repeat-containing protein At3g62890 
 zma-u.5   100280928   uncharacterized LOC100280928 
 osa-u.5   4340573   pentatricopeptide repeat-containing protein At5g06540 
 gma-u.5   100801907   pentatricopeptide repeat-containing protein At5g66520 
 sly-u.5   101243689   pentatricopeptide repeat-containing protein At5g66520-like 
 vvi-u.5   100254802   pentatricopeptide repeat-containing protein At5g66520 
 vvi-u.5   100244731   pentatricopeptide repeat-containing protein At5g66520 
 ppo-u.5   18098439   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11413651   pentatricopeptide repeat-containing protein At5g66520 

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Top 50 coexpressed genes to 8085697 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085697 (sbi-r.1 coexpression data)

CoexMap"8085697"


sbiLOC8085697 | Entrez gene ID : 8085697    
Species sbi zma osa gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae ath bna ghi
Paralog 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021319096.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for XP_021319096.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_021319096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085697

.
zma-u.5
for
100280928

.
osa-u.5
for
4340573

.
gma-u.5
for
100801907

.
sly-u.5
for
101243689

.
vvi-u.5
for
100254802

.
vvi-u.5
for
100244731

.
ppo-u.5
for
18098439

.
mtr-u.5
for
11413651

.


Ortholog ID: 8672
Species gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOC100801907 LOC101243689 LOC4340573 LOC100280928 LOC103829596 LOC100254802 LOC18098439 LOC11413651 LOC123162883 LOC123169104 LOC123408782 LOC107931463 LOC107890533 LOC125589877 LOC111199372 LOC8085697 LOC102601105 LOC102607883 LOC100832227 LOC107786857 LOC107782011
Function* pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g06540 uncharacterized LOC100280928 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540-like pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00051 Fructose and mannose metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 3
mtr01200 Carbon metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00030 Pentose phosphate pathway 2
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100801907 101243689 4340573 100280928 103829596 100254802 18098439 11413651 123162883 123169104 123408782 107931463 107890533 125589877 111199372 8085697 102601105 102607883 100832227 107786857 107782011
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