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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085847   pentatricopeptide repeat-containing protein At3g50420 
 zma-u.5   103642187   pentatricopeptide repeat-containing protein At3g50420 
 osa-u.5   4337367   pentatricopeptide repeat-containing protein At3g50420 
 ath-u.5   AT3G50420   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101256553   pentatricopeptide repeat-containing protein At3g50420 
 mtr-u.5   11426309   pentatricopeptide repeat-containing protein At3g50420 

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Top 50 coexpressed genes to 8085847 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085847 (sbi-r.1 coexpression data)

CoexMap"8085847"


sbiLOC8085847 | Entrez gene ID : 8085847    
Species sbi zma osa ath sly mtr bra nta cre vvi cit hvu ppo bdi sot tae bna ghi gma
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021318512.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  chlo_mito 1  (predict for XP_021318512.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_021318512.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085847

.
zma-u.5
for
103642187

.
osa-u.5
for
4337367

.
ath-u.5
for
AT3G50420

.
sly-u.5
for
101256553

.
mtr-u.5
for
11426309

.


Ortholog ID: 12204
Species ath sly osa zma bra mtr tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G50420 LOC101256553 LOC4337367 LOC103642187 LOC103860653 LOC11426309 LOC123190993 LOC123428911 LOC107945312 LOC107933042 LOC8085847 LOC102598084 LOC102614584 LOC100834263 LOC107814600 LOC107765236
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420-like pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420 pentatricopeptide repeat-containing protein At3g50420-like pentatricopeptide repeat-containing protein At3g50420-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03010 Ribosome 2
hvu01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824206 101256553 4337367 103642187 103860653 11426309 123190993 123428911 107945312 107933042 8085847 102598084 102614584 100834263 107814600 107765236
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