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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8086129   argininosuccinate synthase, chloroplastic 
 zma-u.5   100274106   argininosuccinate synthase 
 osa-u.5   4351847   argininosuccinate synthase, chloroplastic 
 ath-u.5   AT4G24830   arginosuccinate synthase family 
 gma-u.5   100816038   argininosuccinate synthase, chloroplastic 
 gma-u.5   100797468   argininosuccinate synthase, chloroplastic 
 gma-u.5   100795886   argininosuccinate synthase, chloroplastic-like 
 sly-u.5   ASS   argininosuccinate synthase 
 vvi-u.5   100266261   argininosuccinate synthase, chloroplastic 
 ppo-u.5   7491622   argininosuccinate synthase, chloroplastic 
 ppo-u.5   7490894   argininosuccinate synthase, chloroplastic 
 mtr-u.5   11419138   argininosuccinate synthase, chloroplastic 
 mtr-u.5   11414012   argininosuccinate synthase, chloroplastic 
 mtr-u.5   11426372   argininosuccinate synthase, chloroplastic 

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Top 50 coexpressed genes to 8086129 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8086129 (sbi-r.1 coexpression data)

CoexMap"8086129"


sbiLOC8086129 | Entrez gene ID : 8086129      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 3 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00220 [list] [network] Arginine biosynthesis (33 genes)
sbi00250 [list] [network] Alanine, aspartate and glutamate metabolism (49 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0000050 [list] [network] urea cycle  (2 genes)  IEA  
GO:0000053 [list] [network] argininosuccinate metabolic process  (2 genes)  IEA  
GO:0006526 [list] [network] L-arginine biosynthetic process  (11 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004055 [list] [network] argininosuccinate synthase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002442053.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002442053.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002442053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8086129

.
zma-u.5
for
100274106

.
osa-u.5
for
4351847

.
ath-u.5
for
AT4G24830

.
gma-u.5
for
100816038

.
gma-u.5
for
100797468

.
gma-u.5
for
100795886

.
sly-u.5
for
ASS

.
vvi-u.5
for
100266261

.
ppo-u.5
for
7491622

.
ppo-u.5
for
7490894

.
mtr-u.5
for
11419138

.
mtr-u.5
for
11414012

.
mtr-u.5
for
11426372

.


Ortholog ID: 6317
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT4G24830 LOC100797468 LOC100499845 ASS LOC4351847 LOC100274106 LOC103861509 LOC103862653 LOC100266261 LOC7491622 LOC7490894 LOC11419138 LOC11426372 LOC123054635 LOC123181902 LOC123442236 LOC107949646 LOC107941042 LOC106440771 LOC106410331 CHLRE_09g416050v5 LOC8086129 LOC102596102 LOC102630538 LOC100833059 LOC100844015 LOC107784999 LOC107780821
Function* arginosuccinate synthase family argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase argininosuccinate synthase, chloroplastic argininosuccinate synthase argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic-like argininosuccinate synthase, chloroplastic uncharacterized protein argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic argininosuccinate synthase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath01210 2-Oxocarboxylic acid metabolism 7
ath00290 Valine, leucine and isoleucine biosynthesis 5
ath03010 Ribosome 4
ath00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00220 Arginine biosynthesis 2
gma01200 Carbon metabolism 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00220 Arginine biosynthesis 3
gma00190 Oxidative phosphorylation 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 7
sly01200 Carbon metabolism 7
sly00061 Fatty acid biosynthesis 7
sly01212 Fatty acid metabolism 7
sly00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 9
osa00190 Oxidative phosphorylation 5
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00220 Arginine biosynthesis 3
osa00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi01230 Biosynthesis of amino acids 3
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03015 mRNA surveillance pathway 4
ppo03018 RNA degradation 4
ppo01230 Biosynthesis of amino acids 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr01230 Biosynthesis of amino acids 3
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00220 Arginine biosynthesis 6
tae00340 Histidine metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae00220 Arginine biosynthesis 4
tae00500 Starch and sucrose metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 9
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu01200 Carbon metabolism 3
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 10
cre01230 Biosynthesis of amino acids 9
cre00250 Alanine, aspartate and glutamate metabolism 6
cre01210 2-Oxocarboxylic acid metabolism 4
cre00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi03010 Ribosome 3
sbi03013 Nucleocytoplasmic transport 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 7
bdi00300 Lysine biosynthesis 4
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 9
bdi03010 Ribosome 5
bdi00300 Lysine biosynthesis 5
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta03013 Nucleocytoplasmic transport 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00220 Arginine biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828586 100797468 100499845 101267891 4351847 100274106 103861509 103862653 100266261 7491622 7490894 11419138 11426372 123054635 123181902 123442236 107949646 107941042 106440771 106410331 5722377 8086129 102596102 102630538 100833059 100844015 107784999 107780821
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