ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	PFK5	phosphofructokinase 5
ath-r.7	PFK5	phosphofructokinase 5
ath-m.9	PFK5	phosphofructokinase 5
ath-e.2	PFK5	phosphofructokinase 5
ath-m.4.bio	PFK5	phosphofructokinase 5
ath-m.4.hor	PFK5	phosphofructokinase 5
ath-m.4.lig	PFK5	phosphofructokinase 5
ath-m.4.str	PFK5	phosphofructokinase 5
ath-m.4.tis	PFK5	phosphofructokinase 5
gma-u.5	100793883	ATP-dependent 6-phosphofructokinase 5, chloroplastic
gma-u.5	100780164	ATP-dependent 6-phosphofructokinase 5, chloroplastic
vvi-u.5	100242301	ATP-dependent 6-phosphofructokinase 5, chloroplastic
ppo-u.5	7480192	ATP-dependent 6-phosphofructokinase 5, chloroplastic
mtr-u.5	11423706	ATP-dependent 6-phosphofructokinase 5, chloroplastic
mtr-u.5	11405809	ATP-dependent 6-phosphofructokinase 5, chloroplastic
sly-u.5	101268243	ATP-dependent 6-phosphofructokinase 5, chloroplastic
sly-u.5	101245938	ATP-dependent 6-phosphofructokinase 5, chloroplastic-like
osa-u.5	4347060	ATP-dependent 6-phosphofructokinase 5, chloroplastic
osa-u.5	4348582	ATP-dependent 6-phosphofructokinase 5, chloroplastic
zma-u.5	100280694	pyrophosphate--fructose 6-phosphate 1-phosphotransferase
zma-u.5	103647427	ATP-dependent 6-phosphofructokinase 5, chloroplastic
zma-u.5	100279231	ATP-dependent 6-phosphofructokinase 5 chloroplastic

Top 50 coexpressed genes to PFK5 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to PFK5 (ath-u.5 coexpression data)

CoexMap"816781"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)

ath00030 [list] [network] Pentose phosphate pathway (58 genes)

ath00051 [list] [network] Fructose and mannose metabolism (62 genes)

ath00052 [list] [network] Galactose metabolism (56 genes)

ath01200 [list] [network] Carbon metabolism (275 genes)

ath01230 [list] [network] Biosynthesis of amino acids (242 genes)

ath03018 [list] [network] RNA degradation (114 genes)

GO BP

GO:0006002 [list] [network] fructose 6-phosphate metabolic process	(8 genes)	IEA
GO:0006096 [list] [network] glycolytic process	(21 genes)	ISS

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

IDA ISM

GO MF

GO:0003872 [list] [network] 6-phosphofructokinase activity

(7 genes)

ISS

Protein

NP_850025.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for NP_850025.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_850025.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for PFK5	ath-r.7 for PFK5	ath-m.9 for PFK5	ath-e.2 for PFK5	ath-m.4.bio for PFK5	ath-m.4.hor for PFK5	ath-m.4.lig for PFK5	ath-m.4.str for PFK5	ath-m.4.tis for PFK5	gma-u.5 for 100793883	gma-u.5 for 100780164	vvi-u.5 for 100242301	ppo-u.5 for 7480192	mtr-u.5 for 11423706	mtr-u.5 for 11405809	sly-u.5 for 101268243	sly-u.5 for 101245938	osa-u.5 for 4347060	osa-u.5 for 4348582	zma-u.5 for 100280694	zma-u.5 for 103647427	zma-u.5 for 100279231

Ortholog

Ortholog ID: 3428

Species

ath

bra

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PFK5

Function^*

phosphofructokinase 5

ATP-dependent 6-phosphofructokinase 5, chloroplastic

ATP-dependent 6-phosphofructokinase 5, chloroplastic-like

ATP-dependent 6-phosphofructokinase 5, chloroplastic

pyrophosphate--fructose 6-phosphate 1-phosphotransferase

ATP-dependent 6-phosphofructokinase 5 chloroplastic

ATP-dependent 6-phosphofructokinase 5, chloroplastic

ATP-dependent 6-phosphofructokinase 5, chloroplastic-like

ATP-dependent 6-phosphofructokinase 5, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	9
ath00020	Citrate cycle (TCA cycle)	8
ath01210	2-Oxocarboxylic acid metabolism	6
ath01230	Biosynthesis of amino acids	5
ath00640	Propanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	8
bra00020	Citrate cycle (TCA cycle)	5
bra01210	2-Oxocarboxylic acid metabolism	5
bra01230	Biosynthesis of amino acids	4
bra00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	8
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	7
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4
cit03010	Ribosome	2
cit01230	Biosynthesis of amino acids	2
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	7
gma00020	Citrate cycle (TCA cycle)	6
gma00190	Oxidative phosphorylation	5
gma01240	Biosynthesis of cofactors	3
gma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	15
gma00010	Glycolysis / Gluconeogenesis	12
gma01230	Biosynthesis of amino acids	11
gma00620	Pyruvate metabolism	8
gma00061	Fatty acid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	3
vvi01200	Carbon metabolism	3
vvi00770	Pantothenate and CoA biosynthesis	2
vvi01240	Biosynthesis of cofactors	2
vvi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	9
ppo00010	Glycolysis / Gluconeogenesis	7
ppo01230	Biosynthesis of amino acids	6
ppo00030	Pentose phosphate pathway	4
ppo00051	Fructose and mannose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	9
mtr00020	Citrate cycle (TCA cycle)	5
mtr01210	2-Oxocarboxylic acid metabolism	5
mtr01230	Biosynthesis of amino acids	3
mtr00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	9
sly00020	Citrate cycle (TCA cycle)	5
sly00620	Pyruvate metabolism	5
sly00190	Oxidative phosphorylation	4
sly00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	8
sly01200	Carbon metabolism	5
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
sly00030	Pentose phosphate pathway	2
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	11
sot00020	Citrate cycle (TCA cycle)	10
sot01210	2-Oxocarboxylic acid metabolism	8
sot01230	Biosynthesis of amino acids	6
sot00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot00010	Glycolysis / Gluconeogenesis	2
sot00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta01200	Carbon metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta01200	Carbon metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00051	Fructose and mannose metabolism	4
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa01200	Carbon metabolism	3
osa00010	Glycolysis / Gluconeogenesis	2
osa00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	3
osa01200	Carbon metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	2
zma00010	Glycolysis / Gluconeogenesis	2
zma00030	Pentose phosphate pathway	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	3
hvu04626	Plant-pathogen interaction	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01240	Biosynthesis of cofactors	2
hvu00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	6
bdi01230	Biosynthesis of amino acids	3
bdi00020	Citrate cycle (TCA cycle)	3
bdi00620	Pyruvate metabolism	3
bdi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2
bdi01250	Biosynthesis of nucleotide sugars	2
bdi01200	Carbon metabolism	2
bdi00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	4
cre00500	Starch and sucrose metabolism	4
cre01230	Biosynthesis of amino acids	3
cre00030	Pentose phosphate pathway	3
cre00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	5
cre00030	Pentose phosphate pathway	3
cre01200	Carbon metabolism	3
cre00010	Glycolysis / Gluconeogenesis	2
cre00051	Fructose and mannose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

816781

103837888

107951697

107949993

102630185

100793883

100780164

100242301

7480192

11423706

11405809

101268243

101245938

102590756

102581441

107776410

107812275

4348582

4347060

100280694

100279231

123087974

123165545

123398234

123406988

8075677

8057789

100842872

100836478

5719698

5722005

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Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	9	2	1	1	2	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to PFK5 (ath-u.5 coexpression data)

Top 50 enrichment test to PFK5 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**