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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TUB7   tubulin beta-7 chain 
 ath-r.7   TUB7   tubulin beta-7 chain 
 ath-m.9   TUB7   tubulin beta-7 chain 
 ath-e.2   TUB7   tubulin beta-7 chain 
 ath-m.4.bio   TUB7   tubulin beta-7 chain 
 ath-m.4.hor   TUB7   tubulin beta-7 chain 
 ath-m.4.lig   TUB7   tubulin beta-7 chain 
 ath-m.4.str   TUB7   tubulin beta-7 chain 
 ath-m.4.tis   TUB7   tubulin beta-7 chain 
 ath-u.5   TUB1   tubulin beta-1 chain 
 ath-u.5   TUB9   tubulin beta-9 chain 
 ath-u.5   TUB6   beta-6 tubulin 
 bra-r.6   103868027   tubulin beta-7 chain 
 bra-r.6   103867806   tubulin beta chain-like 
 bna-r.1   106348302   tubulin beta-8 chain 
 bna-r.1   106347845   tubulin beta-2 chain 
 bna-r.1   106427538   tubulin beta-4 chain 
 ghi-r.1   107917952   tubulin beta chain-like 
 ghi-r.1   107925867   tubulin beta-5 chain 
 ghi-r.1   107926975   tubulin beta-9 chain 
 cit-r.1   102631140   tubulin beta chain 
 cit-r.1   102612058   tubulin beta chain-like 
 cit-r.1   102612022   tubulin beta-1 chain 
 gma-u.5   100819883   tubulin beta chain 
 gma-u.5   100818878   tubulin beta chain 
 gma-u.5   100816898   tubulin beta-2 chain-like 
 vvi-u.5   100265052   tubulin beta-4 chain 
 vvi-u.5   100259087   tubulin beta-1 chain 
 vvi-u.5   100261736   tubulin beta-1 chain 
 ppo-u.5   7465861   tubulin beta chain 
 ppo-u.5   7465852   tubulin beta-5 chain 
 ppo-u.5   7464075   tubulin beta-5 chain 
 mtr-u.5   11437601   tubulin beta-2 chain 
 mtr-u.5   11439086   tubulin beta-2 chain 
 mtr-u.5   11438618   tubulin beta-1 chain 
 sly-u.5   101248630   tubulin beta-5 chain 
 sly-u.5   101253952   tubulin beta-2 chain 
 sly-u.5   TUB   beta-tubulin 
 sot-r.1   102577679   uncharacterized LOC102577679 
 sot-r.1   102594814   tubulin beta-2 chain-like 
 sot-r.1   102594131   tubulin beta-1 chain 
 nta-r.1   107818269   tubulin beta-2 chain 
 nta-r.1   107815756   tubulin beta-1 chain 
 nta-r.1   107814855   tubulin beta-1 chain 
 osa-u.5   4327550   tubulin beta-4 chain-like 
 osa-u.5   4326917   tubulin beta-1 chain-like 
 osa-u.5   4328420   tubulin beta-5 chain-like 
 zma-u.5   100273658   beta tubulin1 
 zma-u.5   100272336   uncharacterized LOC100272336 
 zma-u.5   100382290   beta tubulin6 
 tae-r.2   543258   tubulin beta-2 chain-like 
 tae-r.2   123137750   tubulin beta-5 chain 
 tae-r.2   123062345   tubulin beta-2 chain-like 
 hvu-r.1   123446959   tubulin beta-3 chain 
 hvu-r.1   123441570   tubulin delta chain-like 
 hvu-r.1   123413646   tubulin beta-3 chain-like 
 sbi-r.1   8059525   tubulin beta-1 chain 
 sbi-r.1   8061601   tubulin beta-7 chain 
 sbi-r.1   8076107   tubulin beta chain 
 bdi-r.1   100839446   tubulin beta-2 chain 
 bdi-r.1   100842099   tubulin beta-3 chain 
 bdi-r.1   100843442   tubulin beta chain 
 cre-r.1   CHLRE_12g542250v5   uncharacterized protein 
 cre-r.1   CHLRE_12g549550v5   uncharacterized protein 

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Top 50 coexpressed genes to TUB7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TUB7 (ath-u.5 coexpression data)

CoexMap"817504"


athTUB7 | Entrez gene ID : 817504      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04145 [list] [network] Phagosome (87 genes)
ath04517 [list] [network] IgSF CAM signaling (50 genes)
ath04814 [list] [network] Motor proteins (82 genes)
GO BP
GO:0007017 [list] [network] microtubule-based process  (141 genes)  ISS  
GO CC
GO:0045298 [list] [network] tubulin complex  (13 genes)  ISS  
GO:0005777 [list] [network] peroxisome  (313 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (23 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_180515.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  vacu 1,  cysk 1  (predict for NP_180515.1)
Subcellular
localization
TargetP
other 8  (predict for NP_180515.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TUB7
ath-r.7
for
TUB7
ath-m.9
for
TUB7
ath-e.2
for
TUB7
ath-m.4.bio
for
TUB7
ath-m.4.hor
for
TUB7
ath-m.4.lig
for
TUB7
ath-m.4.str
for
TUB7
ath-m.4.tis
for
TUB7
ath-u.5
for
TUB1
ath-u.5
for
TUB9
ath-u.5
for
TUB6
bra-r.6
for
103868027
bra-r.6
for
103867806
bna-r.1
for
106348302
bna-r.1
for
106347845
bna-r.1
for
106427538
ghi-r.1
for
107917952
ghi-r.1
for
107925867
ghi-r.1
for
107926975
cit-r.1
for
102631140
cit-r.1
for
102612058
cit-r.1
for
102612022
gma-u.5
for
100819883
gma-u.5
for
100818878
gma-u.5
for
100816898
vvi-u.5
for
100265052
vvi-u.5
for
100259087
vvi-u.5
for
100261736
ppo-u.5
for
7465861
ppo-u.5
for
7465852
ppo-u.5
for
7464075
mtr-u.5
for
11437601
mtr-u.5
for
11439086
mtr-u.5
for
11438618
sly-u.5
for
101248630
sly-u.5
for
101253952
sly-u.5
for
TUB
sot-r.1
for
102577679
sot-r.1
for
102594814
sot-r.1
for
102594131
nta-r.1
for
107818269
nta-r.1
for
107815756
nta-r.1
for
107814855
osa-u.5
for
4327550
osa-u.5
for
4326917
osa-u.5
for
4328420
zma-u.5
for
100273658
zma-u.5
for
100272336
zma-u.5
for
100382290
tae-r.2
for
543258
tae-r.2
for
123137750
tae-r.2
for
123062345
hvu-r.1
for
123446959
hvu-r.1
for
123441570
hvu-r.1
for
123413646
sbi-r.1
for
8059525
sbi-r.1
for
8061601
sbi-r.1
for
8076107
bdi-r.1
for
100839446
bdi-r.1
for
100842099
bdi-r.1
for
100843442
cre-r.1
for
CHLRE_12g542250v5
cre-r.1
for
CHLRE_12g549550v5


Ortholog ID: 112
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre
Symbol TUB7 TUB2 TUB3 LOC103873591 LOC103858467 LOC103873285 LOC106418189 LOC106372358 LOC106375684 LOC107906593 LOC107906323 LOC107942409 LOC102612022 LOC102615364 LOC102577942 LOC100816898 TUBB2 TUBB3 LOC100259087 LOC100247828 LOC100259401 LOC18095120 LOC7478050 LOC11437601 LOC11438618 LOC25491473 LOC101248630 LOC101253952 LOC101262621 LOC102577679 LOC102586422 LOC102597692 LOC107818269 LOC107832837 LOC107781181 LOC4326917 LOC4341810 LOC4331315 LOC100502086 LOC542239 LOC103629648 LOC123156491 LOC123132419 LOC123106070 LOC123442982 LOC123452511 LOC123444074 LOC8076107 LOC8057201 LOC110433857 LOC100839446 LOC100830051 LOC100836144 CHLRE_12g542250v5 CHLRE_12g549550v5
Function* tubulin beta-7 chain tubulin beta chain 2 tubulin beta chain 3 tubulin beta-2 chain tubulin beta-9 chain tubulin beta-2 chain tubulin beta-4 chain-like tubulin beta-6 chain tubulin beta-9 chain tubulin beta-2 chain-like tubulin beta-5 chain-like tubulin beta chain tubulin beta-1 chain tubulin beta chain tubulin beta chain tubulin beta-2 chain-like tubulin beta-2 beta-tubulin tubulin beta-1 chain tubulin beta-2 chain tubulin beta chain tubulin beta-4 chain tubulin beta-1 chain tubulin beta-2 chain tubulin beta-1 chain tubulin beta-1 chain tubulin beta-5 chain tubulin beta-2 chain tubulin beta-8 chain uncharacterized LOC102577679 tubulin beta-5 chain tubulin beta chain-like tubulin beta-2 chain tubulin beta-1 chain tubulin beta-8 chain-like tubulin beta-1 chain-like tubulin beta-3 chain-like tubulin beta-2 chain-like uncharacterized LOC100502086 beta-6 tubulin tubulin beta-7 chain-like tubulin beta-3 chain-like tubulin beta-3 chain-like tubulin beta-2 chain tubulin beta-1 chain tubulin beta-4 chain tubulin beta-5 chain tubulin beta chain tubulin beta-3 chain tubulin beta-5 chain tubulin beta-2 chain tubulin beta-4 chain tubulin beta-5 chain uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 11
ath04145 Phagosome 10
ath04517 IgSF CAM signaling 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 5
ath04517 IgSF CAM signaling 5
ath04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 8
ath04145 Phagosome 7
ath04517 IgSF CAM signaling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 6
bra04145 Phagosome 5
bra04517 IgSF CAM signaling 5
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 6
bra04517 IgSF CAM signaling 6
bra04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 6
bra04145 Phagosome 5
bra04517 IgSF CAM signaling 5
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 10
bna04517 IgSF CAM signaling 10
bna04814 Motor proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 2
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
bna00940 Phenylpropanoid biosynthesis 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 5
bna04517 IgSF CAM signaling 5
bna04814 Motor proteins 5
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 6
ghi04517 IgSF CAM signaling 6
ghi04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 4
ghi04517 IgSF CAM signaling 4
ghi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 10
ghi04145 Phagosome 5
ghi00260 Glycine, serine and threonine metabolism 4
ghi00270 Cysteine and methionine metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 8
cit04145 Phagosome 6
cit04517 IgSF CAM signaling 6
cit00541 Biosynthesis of various nucleotide sugars 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 6
cit04517 IgSF CAM signaling 6
cit04814 Motor proteins 6
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 5
cit04517 IgSF CAM signaling 5
cit04814 Motor proteins 5
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma01200 Carbon metabolism 3
gma04145 Phagosome 2
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma04145 Phagosome 4
gma04517 IgSF CAM signaling 4
gma04814 Motor proteins 4
gma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 5
gma04517 IgSF CAM signaling 5
gma04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 5
vvi04517 IgSF CAM signaling 5
vvi04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 8
vvi04517 IgSF CAM signaling 8
vvi04814 Motor proteins 8
vvi00670 One carbon pool by folate 3
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 9
ppo04517 IgSF CAM signaling 9
ppo04814 Motor proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 5
ppo04145 Phagosome 4
ppo04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 9
mtr04517 IgSF CAM signaling 8
mtr04814 Motor proteins 8
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 3
mtr04517 IgSF CAM signaling 3
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 8
mtr04517 IgSF CAM signaling 7
mtr04814 Motor proteins 7
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 6
sly04517 IgSF CAM signaling 6
sly04814 Motor proteins 6
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 4
sly04517 IgSF CAM signaling 4
sly04814 Motor proteins 4
sly04144 Endocytosis 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04517 IgSF CAM signaling 7
sly04145 Phagosome 6
sly04814 Motor proteins 6
sly04148 Efferocytosis 2
sly04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 9
sot04517 IgSF CAM signaling 9
sot04814 Motor proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 5
sot04517 IgSF CAM signaling 5
sot04814 Motor proteins 5
sot00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 8
sot04517 IgSF CAM signaling 8
sot04814 Motor proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 7
nta04517 IgSF CAM signaling 7
nta04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 7
nta04517 IgSF CAM signaling 7
nta04814 Motor proteins 7
nta00600 Sphingolipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 6
osa04517 IgSF CAM signaling 6
osa04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 5
osa04145 Phagosome 4
osa04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 12
zma04145 Phagosome 11
zma04517 IgSF CAM signaling 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 11
zma04517 IgSF CAM signaling 11
zma04814 Motor proteins 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 14
zma04145 Phagosome 9
zma04517 IgSF CAM signaling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 8
tae01250 Biosynthesis of nucleotide sugars 8
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 5
tae04517 IgSF CAM signaling 5
tae04814 Motor proteins 5
tae00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04517 IgSF CAM signaling 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 10
sbi04517 IgSF CAM signaling 10
sbi04814 Motor proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 12
sbi04145 Phagosome 11
sbi04517 IgSF CAM signaling 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 12
sbi04145 Phagosome 11
sbi04517 IgSF CAM signaling 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 12
bdi04517 IgSF CAM signaling 12
bdi04814 Motor proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 11
bdi04517 IgSF CAM signaling 11
bdi04814 Motor proteins 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 12
bdi04517 IgSF CAM signaling 12
bdi04814 Motor proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 5
cre04145 Phagosome 4
cre04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04145 Phagosome 4
cre04517 IgSF CAM signaling 4
cre04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817504 836390 836391 103873591 103858467 103873285 106418189 106372358 106375684 107906593 107906323 107942409 102612022 102615364 102577942 100816898 100811275 547844 100259087 100247828 100259401 18095120 7478050 11437601 11438618 25491473 101248630 101253952 101262621 102577679 102586422 102597692 107818269 107832837 107781181 4326917 4341810 4331315 100502086 542239 103629648 123156491 123132419 123106070 123442982 123452511 123444074 8076107 8057201 110433857 100839446 100830051 100836144 5719519 5719644
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