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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-r.7   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.9   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-e.2   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.4.str   WDR55   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   WDR55   transducin family protein / WD-40 repeat family protein 
 gma-u.5   100820220   WD repeat-containing protein 55 
 gma-u.5   100792826   WD repeat-containing protein 55 
 gma-u.5   100777451   WD repeat-containing protein 55 
 vvi-u.5   100241888   WD repeat-containing protein 55 
 vvi-u.5   100260046   WD repeat-containing protein 55 
 ppo-u.5   18099440   WD repeat-containing protein 55 
 ppo-u.5   7456844   WD repeat-containing protein 55 
 mtr-u.5   11438101   WD repeat-containing protein 55 
 mtr-u.5   25492893   WD repeat-containing protein 55 
 sly-u.5   101265597   WD repeat-containing protein 55 
 osa-u.5   4344178   WD repeat-containing protein 55 
 zma-u.5   100193903   uncharacterized LOC100193903 

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Top 50 coexpressed genes to WDR55 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to WDR55 (ath-u.5 coexpression data)

CoexMap"817987"


athWDR55 | Entrez gene ID : 817987      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 3 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009855 [list] [network] determination of bilateral symmetry  (8 genes)  IMP  
GO:0080186 [list] [network] developmental vegetative growth  (11 genes)  IMP  
GO:0010197 [list] [network] polar nucleus fusion  (31 genes)  IMP  
GO:0009960 [list] [network] endosperm development  (35 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (161 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565782.1 [sequence] [blastp]
NP_973596.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_565782.1)
cyto 4,  nucl 2,  cysk 1,  golg 1,  chlo 1,  extr 1,  golg_plas 1,  cysk_plas 1  (predict for NP_973596.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565782.1)
scret 8  (predict for NP_973596.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
WDR55

.
ath-r.7
for
WDR55

.
ath-m.9
for
WDR55

.
ath-e.2
for
WDR55

.
ath-m.4.bio
for
WDR55

.
ath-m.4.hor
for
WDR55

.
ath-m.4.lig
for
WDR55

.
ath-m.4.str
for
WDR55

.
ath-m.4.tis
for
WDR55

.
gma-u.5
for
100820220

.
gma-u.5
for
100792826

.
gma-u.5
for
100777451

.
vvi-u.5
for
100241888

.
vvi-u.5
for
100260046

.
ppo-u.5
for
18099440

.
ppo-u.5
for
7456844

.
mtr-u.5
for
11438101

.
mtr-u.5
for
25492893

.
sly-u.5
for
101265597

.
osa-u.5
for
4344178

.
zma-u.5
for
100193903

.


Ortholog ID: 6826
Species ath gma gma sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol WDR55 LOC100777451 LOC100792826 LOC101265597 LOC4344178 LOC100193903 LOC103865324 LOC100260046 LOC100241888 LOC7456844 LOC18099440 LOC11438101 LOC25492893 LOC123182740 LOC123064263 LOC123448766 LOC107959602 LOC107959473 LOC106433889 LOC106447508 CHLRE_02g113250v5 LOC8068971 LOC8085141 LOC102592919 LOC102630550 LOC100839604 LOC107786560 LOC107764931
Function* transducin family protein / WD-40 repeat family protein WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 uncharacterized LOC100193903 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 uncharacterized protein WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55 WD repeat-containing protein 55
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 6
gma00340 Histidine metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00650 Butanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817987 100777451 100792826 101265597 4344178 100193903 103865324 100260046 100241888 7456844 18099440 11438101 25492893 123182740 123064263 123448766 107959602 107959473 106433889 106447508 5725453 8068971 8085141 102592919 102630550 100839604 107786560 107764931
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