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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-r.7   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.9   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-e.2   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.4.str   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-u.5   EMB93   Mitochondrial transcription termination factor family protein 
 ath-u.5   EMB3114   Mitochondrial transcription termination factor family protein 
 gma-u.5   100804440   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100801948   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100794678   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100254596   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100247222   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100853685   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   18101448   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   18109089   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   25486960   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11422152   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11415133   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   112941526   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101259687   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101255820   protein SEEDLING LETHAL 1, chloroplastic 
 osa-u.5   4332887   protein SEEDLING LETHAL 1, chloroplastic 
 osa-u.5   4329761   transcription termination factor MTEF1, chloroplastic 
 zma-u.5   103635234   uncharacterized LOC103635234 
 zma-u.5   100273894   uncharacterized LOC100273894 
 zma-u.5   100284573   mTERF-like protein 

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Top 50 coexpressed genes to AT2G34620 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G34620 (ath-u.5 coexpression data)

CoexMap"818027"


athAT2G34620 | Entrez gene ID : 818027      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 3 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071472 [list] [network] cellular response to salt stress  (42 genes)  IMP  
GO CC
GO:0042646 [list] [network] plastid nucleoid  (55 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_181009.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto_nucl 3,  cyto 2,  chlo 1,  mito 1,  cyto_mito 1,  extr 1,  pero 1  (predict for NP_181009.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_181009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G34620
ath-r.7
for
AT2G34620
ath-m.9
for
AT2G34620
ath-e.2
for
AT2G34620
ath-m.4.bio
for
AT2G34620
ath-m.4.hor
for
AT2G34620
ath-m.4.lig
for
AT2G34620
ath-m.4.str
for
AT2G34620
ath-m.4.tis
for
AT2G34620
ath-u.5
for
EMB93
ath-u.5
for
EMB3114
gma-u.5
for
100804440
gma-u.5
for
100801948
gma-u.5
for
100794678
vvi-u.5
for
100254596
vvi-u.5
for
100247222
vvi-u.5
for
100853685
ppo-u.5
for
18101448
ppo-u.5
for
18109089
mtr-u.5
for
25486960
mtr-u.5
for
11422152
mtr-u.5
for
11415133
sly-u.5
for
112941526
sly-u.5
for
101259687
sly-u.5
for
101255820
osa-u.5
for
4332887
osa-u.5
for
4329761
zma-u.5
for
103635234
zma-u.5
for
100273894
zma-u.5
for
100284573


Ortholog ID: 1479
Species ath ath bra bna bna ghi cit cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT2G34620 EMB93 LOC103875451 LOC106396429 LOC106369326 LOC107960139 LOC102624544 LOC102618922 LOC100794678 LOC100785219 LOC100254596 LOC100853685 LOC7497062 LOC11415133 LOC25486960 LOC101255820 LOC101259687 LOC102584074 LOC102603805 LOC107761928 LOC4329761 LOC103635234 LOC100284573 LOC123105312 LOC123092010 LOC123404150 LOC123452572 LOC110432040 LOC8070549 LOC100838407 LOC100829532 CHLRE_12g542500v5
Function* Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic mTERF domain-containing protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic protein SEEDLING LETHAL 1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC102584074 uncharacterized LOC102603805 protein SEEDLING LETHAL 1, chloroplastic-like transcription termination factor MTEF1, chloroplastic uncharacterized LOC103635234 mTERF-like protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic-like transcription termination factor MTEF1, chloroplastic-like transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
vvi00196 Photosynthesis - antenna proteins 5
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 12
sly00860 Porphyrin metabolism 5
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00480 Glutathione metabolism 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00906 Carotenoid biosynthesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 4
hvu00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818027 814834 103875451 106396429 106369326 107960139 102624544 102618922 100794678 100785219 100254596 100853685 7497062 11415133 25486960 101255820 101259687 102584074 102603805 107761928 4329761 103635234 100284573 123105312 123092010 123404150 123452572 110432040 8070549 100838407 100829532 5719523
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