ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT2G35330	RING/U-box superfamily protein
ath-r.7	AT2G35330	RING/U-box superfamily protein
ath-m.9	AT2G35330	RING/U-box superfamily protein
ath-e.2	AT2G35330	RING/U-box superfamily protein
ath-m.4.bio	AT2G35330	RING/U-box superfamily protein
ath-m.4.hor	AT2G35330	RING/U-box superfamily protein
ath-m.4.lig	AT2G35330	RING/U-box superfamily protein
ath-m.4.str	AT2G35330	RING/U-box superfamily protein
ath-m.4.tis	AT2G35330	RING/U-box superfamily protein
ath-u.5	AT1G32530	RING/U-box superfamily protein
gma-u.5	100789166	MND1-interacting protein 1
gma-u.5	100777787	MND1-interacting protein 1
gma-u.5	100797917	MND1-interacting protein 1
vvi-u.5	100249004	MND1-interacting protein 1
ppo-u.5	18094186	MND1-interacting protein 1
ppo-u.5	7465482	MND1-interacting protein 1
mtr-u.5	11405764	MND1-interacting protein 1
sly-u.5	101256309	MND1-interacting protein 1-like
sly-u.5	101264748	MND1-interacting protein 1-like
osa-u.5	4346894	MND1-interacting protein 1
zma-u.5	100278886	MND1-interacting protein 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0061659 [list] [network] ubiquitin-like protein ligase activity	(88 genes)	IDA
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_001189683.1 [sequence] [blastp]
NP_181076.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cysk 2, chlo 1, mito 1, cyto_mito 1, cysk_plas 1	(predict for NP_001189683.1)
chlo 8, mito 1, extr 1, cysk 1	(predict for NP_181076.3)

Subcellular
localization
TargetP

other 6	(predict for NP_001189683.1)
scret 3	(predict for NP_181076.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G35330	ath-r.7 for AT2G35330	ath-m.9 for AT2G35330	ath-e.2 for AT2G35330	ath-m.4.bio for AT2G35330	ath-m.4.hor for AT2G35330	ath-m.4.lig for AT2G35330	ath-m.4.str for AT2G35330	ath-m.4.tis for AT2G35330	ath-u.5 for AT1G32530	gma-u.5 for 100789166	gma-u.5 for 100777787	gma-u.5 for 100797917	vvi-u.5 for 100249004	ppo-u.5 for 18094186	ppo-u.5 for 7465482	mtr-u.5 for 11405764	sly-u.5 for 101256309	sly-u.5 for 101264748	osa-u.5 for 4346894	zma-u.5 for 100278886

Ortholog

Ortholog ID: 5701

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

RING/U-box superfamily protein

MND1-interacting protein 1

MND1-interacting protein 1-like

MND1-interacting protein 1

MND1-interacting protein 1-like

MND1-interacting protein 1

MND1-interacting protein 1-like

MND1-interacting protein 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00100	Steroid biosynthesis	2
bra00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2
bra00564	Glycerophospholipid metabolism	2
bra00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00785	Lipoic acid metabolism	2
ppo01240	Biosynthesis of cofactors	2
ppo00310	Lysine degradation	2
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma03013	Nucleocytoplasmic transport	3
zma03040	Spliceosome	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

818100

840147

103874885

103840154

106361637

106437213

107933729

121215624

102617307

100777787

100789166

100249004

7465482

18094186

11405764

101264748

101256309

102600104

107812496

107805929

4346894

100278886

123103615

123111829

123395487

8056182

100841886

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G35330 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G35330 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	10	3	1	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G35330 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G35330 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**