ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT5G13560	structural maintenance of chromosomes protein
bra-r.6	103865593	uncharacterized LOC103865593
bra-r.6	103850879	myosin-11
bna-r.1	BNAC04G45100D	uncharacterized BNAC04G45100D
bna-r.1	111205558	uncharacterized LOC111205558
ghi-r.1	107930732	uncharacterized LOC107930732
ghi-r.1	107959897	uncharacterized LOC107959897
ghi-r.1	107897766	uncharacterized LOC107897766
cit-r.1	102615746	COP1-interactive protein 1
cit-r.1	102613086	uncharacterized LOC102613086
gma-u.5	100803121	uncharacterized LOC100803121
vvi-u.5	100244989	protein MLP1
vvi-u.5	100249942	uncharacterized LOC100249942
ppo-u.5	7469790	uncharacterized LOC7469790
ppo-u.5	7458616	uncharacterized LOC7458616
mtr-u.5	25485747	synaptonemal complex protein 1
sly-u.5	101267106	uncharacterized LOC101267106
sot-r.1	102596582	coiled-coil domain-containing protein 18-like
sot-r.1	102579701	sporulation-specific protein 15-like
nta-r.1	107762325	uncharacterized LOC107762325
nta-r.1	107767246	uncharacterized LOC107767246
nta-r.1	107780496	uncharacterized LOC107780496
osa-u.5	4324078	uncharacterized LOC4324078
osa-u.5	9272304	uncharacterized LOC9272304
zma-u.5	103630051	myosin-2 heavy chain-like
zma-u.5	100304331	uncharacterized LOC100304331
tae-r.2	123060563	A-kinase anchor protein 9
tae-r.2	123077649	A-kinase anchor protein 9
tae-r.2	123180612	uncharacterized LOC123180612
hvu-r.1	123443064	uncharacterized LOC123443064
hvu-r.1	123426281	coiled-coil domain-containing protein 150-like
sbi-r.1	8059126	kinesin-like protein KIF27
sbi-r.1	8071201	myosin-10
bdi-r.1	100840108	cytadherence high molecular weight protein 2
bdi-r.1	100834063	uncharacterized LOC100834063
bdi-r.1	100824671	protein Hook homolog 3

Top 50 coexpressed genes to AT5G13560 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G13560 (ath-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

centrosomal protein of 135 kDa-like protein

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus	(10367 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

Protein

NP_001324395.1 [sequence] [blastp]
NP_001324396.1 [sequence] [blastp]
NP_001324397.1 [sequence] [blastp]
NP_181273.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 2, cyto 1	(predict for NP_001324395.1)
nucl 6, chlo 2, cyto 1	(predict for NP_001324396.1)
mito 4, nucl 3, mito_plas 3	(predict for NP_001324397.1)
nucl 6, chlo 2, cyto 1	(predict for NP_181273.3)

Subcellular
localization
TargetP

other 4, mito 4	(predict for NP_001324395.1)
other 4, mito 4	(predict for NP_001324396.1)
other 4, mito 4	(predict for NP_001324397.1)
other 4, mito 4	(predict for NP_181273.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G13560	bra-r.6 for 103865593	bra-r.6 for 103850879	bna-r.1 for BNAC04G45100D	bna-r.1 for 111205558	ghi-r.1 for 107930732	ghi-r.1 for 107959897	ghi-r.1 for 107897766	cit-r.1 for 102615746	cit-r.1 for 102613086	gma-u.5 for 100803121	vvi-u.5 for 100244989	vvi-u.5 for 100249942	ppo-u.5 for 7469790	ppo-u.5 for 7458616	mtr-u.5 for 25485747	sly-u.5 for 101267106	sot-r.1 for 102596582	sot-r.1 for 102579701	nta-r.1 for 107762325	nta-r.1 for 107767246	nta-r.1 for 107780496	osa-u.5 for 4324078	osa-u.5 for 9272304	zma-u.5 for 103630051	zma-u.5 for 100304331	tae-r.2 for 123060563	tae-r.2 for 123077649	tae-r.2 for 123180612	hvu-r.1 for 123443064	hvu-r.1 for 123426281	sbi-r.1 for 8059126	sbi-r.1 for 8071201	bdi-r.1 for 100840108	bdi-r.1 for 100834063	bdi-r.1 for 100824671

Please wait a moment.

Ortholog

Ortholog ID: 2994

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

structural maintenance of chromosomes protein

myosin-11

myosin-11-like

polyamine-modulated factor 1-binding protein 1

uncharacterized LOC107930732

uncharacterized LOC107959897

uncharacterized LOC107926079

COP1-interactive protein 1

uncharacterized LOC102613086

uncharacterized LOC100803121

protein MLP1

uncharacterized LOC100249942

uncharacterized LOC7469790

uncharacterized LOC7458616

synaptonemal complex protein 1

uncharacterized LOC101267106

coiled-coil domain-containing protein 18-like

sporulation-specific protein 15-like

uncharacterized LOC107762325

uncharacterized LOC107780496

uncharacterized LOC107820666

uncharacterized LOC4324078

uncharacterized LOC9272304

myosin-2 heavy chain-like

uncharacterized LOC100304331

A-kinase anchor protein 9

uncharacterized LOC123180612

coiled-coil domain-containing protein 150

uncharacterized LOC123443064

coiled-coil domain-containing protein 150-like

kinesin-like protein KIF27

myosin-10

cytadherence high molecular weight protein 2

uncharacterized LOC100834063

protein Hook homolog 3

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2
bra03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	3
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	3
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	3
mtr04130	SNARE interactions in vesicular transport	2
mtr03083	Polycomb repressive complex	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	3
nta03040	Spliceosome	2
nta03082	ATP-dependent chromatin remodeling	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04144	Endocytosis	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00071	Fatty acid degradation	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa04144	Endocytosis	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	4
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00061	Fatty acid biosynthesis	2
tae00071	Fatty acid degradation	2
tae01212	Fatty acid metabolism	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03450	Non-homologous end-joining	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03450	Non-homologous end-joining	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03022	Basal transcription factors	2

Expression

Expression pattern

Entrez Gene ID^*

831200

103850879

103846562

125579053

106384260

106447380

107930732

107959897

107926079

102615746

102613086

100803121

100244989

100249942

7469790

7458616

25485747

101267106

102596582

102579701

107762325

107780496

107820666

4324078

9272304

103630051

100304331

123077649

123180612

123039280

123443064

123426281

8059126

8071201

100840108

100834063

100824671

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	2	2	3	2	1	2	2	1	1	2	3	2	2	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G13560 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G13560 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**