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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-r.7   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.9   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-e.2   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.bio   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.hor   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.lig   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.str   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.tis   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.5   AT2G37290   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.5   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 gma-u.5   100805928   TBC1 domain family member 8B 
 gma-u.5   100809869   TBC1 domain family member 10B 
 gma-u.5   100775232   ecotropic viral integration site 5 ortholog 
 vvi-u.5   100255322   uncharacterized LOC100255322 
 ppo-u.5   7457898   uncharacterized LOC7457898 
 ppo-u.5   7458625   uncharacterized LOC7458625 
 ppo-u.5   18100252   uncharacterized LOC18100252 
 mtr-u.5   11446021   TBC1 domain family member 8B 
 mtr-u.5   25484063   ecotropic viral integration site 5 protein homolog 
 sly-u.5   101256081   uncharacterized LOC101256081 
 sly-u.5   101262244   uncharacterized LOC101262244 
 osa-u.5   4332461   uncharacterized LOC4332461 
 osa-u.5   4339042   uncharacterized LOC4339042 
 zma-u.5   100278125   uncharacterized LOC100278125 
 zma-u.5   103630445   TBC1 domain family member 10B 
 zma-u.5   103634483   ecotropic viral integration site 5 protein homolog 

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Top 50 coexpressed genes to AT2G39280 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G39280 (ath-u.5 coexpression data)

CoexMap"818513"


athAT2G39280 | Entrez gene ID : 818513      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 3 1 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001189710.1 [sequence] [blastp]
NP_181460.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  chlo 1,  pero 1,  nucl_plas 1  (predict for NP_001189710.1)
cyto_nucl 4,  nucl 4,  cyto 4,  nucl_plas 3  (predict for NP_181460.3)
Subcellular
localization
TargetP
other 3  (predict for NP_001189710.1)
other 7,  mito 3  (predict for NP_181460.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G39280
ath-r.7
for
AT2G39280
ath-m.9
for
AT2G39280
ath-e.2
for
AT2G39280
ath-m.4.bio
for
AT2G39280
ath-m.4.hor
for
AT2G39280
ath-m.4.lig
for
AT2G39280
ath-m.4.str
for
AT2G39280
ath-m.4.tis
for
AT2G39280
ath-u.5
for
AT2G37290
ath-u.5
for
AT3G55020
gma-u.5
for
100805928
gma-u.5
for
100809869
gma-u.5
for
100775232
vvi-u.5
for
100255322
ppo-u.5
for
7457898
ppo-u.5
for
7458625
ppo-u.5
for
18100252
mtr-u.5
for
11446021
mtr-u.5
for
25484063
sly-u.5
for
101256081
sly-u.5
for
101262244
osa-u.5
for
4332461
osa-u.5
for
4339042
zma-u.5
for
100278125
zma-u.5
for
103630445
zma-u.5
for
103634483


Ortholog ID: 1699
Species ath ath bra bra bna bna cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT2G39280 AT3G55020 LOC103867210 LOC103841417 LOC106447700 LOC106396356 LOC102614554 LOC102606977 LOC100805928 LOC100775232 LOC100255322 LOC18100252 LOC7458625 LOC11446021 LOC25484063 LOC101256081 LOC101262244 LOC102579749 LOC102578585 LOC107761523 LOC107778454 LOC4339042 LOC4332461 LOC103634483 LOC100284494 LOC123092512 LOC123059492 LOC123448958 LOC123445163 LOC8081453 LOC8072559 LOC100840960 LOC100831523 CHLRE_02g077700v5
Function* Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein ecotropic viral integration site 5 protein homolog rab GTPase-activating protein 1 TBC1 domain family member 10B ecotropic viral integration site 5 protein homolog uncharacterized LOC102614554 uncharacterized LOC102606977 TBC1 domain family member 8B ecotropic viral integration site 5 ortholog uncharacterized LOC100255322 uncharacterized LOC18100252 uncharacterized LOC7458625 TBC1 domain family member 8B ecotropic viral integration site 5 protein homolog uncharacterized LOC101256081 uncharacterized LOC101262244 TBC1 domain family member 8B-like rab GTPase-activating protein 1-like uncharacterized LOC107761523 uncharacterized LOC107778454 uncharacterized LOC4339042 uncharacterized LOC4332461 ecotropic viral integration site 5 protein homolog rhodopsin-like receptor ecotropic viral integration site 5 protein homolog ecotropic viral integration site 5 protein homolog TBC domain-containing protein C215.01 ecotropic viral integration site 5 protein homolog rab GTPase-activating protein 1 TBC1 domain family member 10B TBC1 domain family member 2A TBC1 domain family member 8B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 3
vvi04814 Motor proteins 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
tae04144 Endocytosis 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818513 824668 103867210 103841417 106447700 106396356 102614554 102606977 100805928 100775232 100255322 18100252 7458625 11446021 25484063 101256081 101262244 102579749 102578585 107761523 107778454 4339042 4332461 103634483 100284494 123092512 123059492 123448958 123445163 8081453 8072559 100840960 100831523 5727237
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