Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   CCD7   carotenoid cleavage dioxygenase 7 
 ath-m.4.bio   CCD7   carotenoid cleavage dioxygenase 7 
 ath-m.4.hor   CCD7   carotenoid cleavage dioxygenase 7 
 ath-m.4.lig   CCD7   carotenoid cleavage dioxygenase 7 
 ath-m.4.str   CCD7   carotenoid cleavage dioxygenase 7 
 ath-m.4.tis   CCD7   carotenoid cleavage dioxygenase 7 
 vvi-u.5   100242750   carotenoid cleavage dioxygenase 7, chloroplastic 
 ppo-u.5   18105151   carotenoid cleavage dioxygenase 7, chloroplastic 
 mtr-u.5   11438975   carotenoid cleavage dioxygenase 7, chloroplastic 
 osa-u.5   4336591   carotenoid cleavage dioxygenase 7, chloroplastic-like 
 zma-u.5   100502521   uncharacterized LOC100502521 

close


Top 50 coexpressed genes to CCD7 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CCD7 (ath-m.9 coexpression data)

CoexMap"819107"


athCCD7 | Entrez gene ID : 819107      
Species ath vvi ppo mtr osa zma tae hvu ghi bdi cit gma bra cre sbi bna sly nta sot
Paralog 6 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00906 [list] [network] Carotenoid biosynthesis (32 genes)
GO BP
GO:0016124 [list] [network] xanthophyll catabolic process  (3 genes)  IDA  
GO:0016121 [list] [network] carotene catabolic process  (4 genes)  IDA IMP  
GO:1901601 [list] [network] strigolactone biosynthetic process  (7 genes)  IDA  
GO:0009635 [list] [network] response to herbicide  (11 genes)  IEP  
GO:0010223 [list] [network] secondary shoot formation  (25 genes)  IGI IMP  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  IDA  
GO MF
GO:0045549 [list] [network] 9-cis-epoxycarotenoid dioxygenase activity  (7 genes)  IDA  
GO:0016702 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen  (29 genes)  IDA  
Protein NP_001318427.1 [sequence] [blastp]
NP_001324720.1 [sequence] [blastp]
NP_182026.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cyto_nucl 3,  cysk_nucl 3  (predict for NP_001318427.1)
nucl 4,  chlo 4,  cyto 1,  cysk 1,  cyto_mito 1  (predict for NP_001324720.1)
chlo 6,  nucl 3,  cyto 1,  cyto_mito 1  (predict for NP_182026.5)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001318427.1)
chlo 6  (predict for NP_001324720.1)
chlo 6  (predict for NP_182026.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
CCD7

.
ath-m.4.bio
for
CCD7

.
ath-m.4.hor
for
CCD7

.
ath-m.4.lig
for
CCD7

.
ath-m.4.str
for
CCD7

.
ath-m.4.tis
for
CCD7

.
vvi-u.5
for
100242750

.
ppo-u.5
for
18105151

.
mtr-u.5
for
11438975

.
osa-u.5
for
4336591

.
zma-u.5
for
100502521

.


Ortholog ID: 9440
Species osa zma vvi ppo mtr hvu ghi ghi sbi nta nta
Symbol LOC4336591 LOC100502521 LOC100242750 LOC18105151 LOC11438975 LOC123427568 LOC107923980 LOC107945551 LOC8055963 LOC107767822 LOC107771847
Function* carotenoid cleavage dioxygenase 7, chloroplastic-like uncharacterized LOC100502521 carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic-like carotenoid cleavage dioxygenase 7, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 3
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4336591 100502521 100242750 18105151 11438975 123427568 107923980 107945551 8055963 107767822 107771847
The preparation time of this page was 0.1 [sec].