ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-r.7	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.9	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-e.2	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.4.bio	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.4.hor	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.4.lig	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.4.str	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-m.4.tis	AT3G07470	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-u.5	AT3G07460	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-u.5	AT5G16380	autophagy-like protein, putative (Protein of unknown function, DUF538)
bra-r.6	103859222	uncharacterized LOC103859222
bra-r.6	103837253	uncharacterized LOC103837253
bra-r.6	103849295	uncharacterized LOC103849295
bna-r.1	106389005	uncharacterized LOC106389005
bna-r.1	BNAA02G30190D	uncharacterized BNAA02G30190D
bna-r.1	111211005	uncharacterized LOC111211005
ghi-r.1	107952760	uncharacterized LOC107952760
ghi-r.1	107924473	uncharacterized LOC107924473
ghi-r.1	107954977	uncharacterized protein At5g01610
cit-r.1	102623032	uncharacterized LOC102623032
cit-r.1	102607361	uncharacterized LOC102607361
gma-u.5	100812072	uncharacterized LOC100812072
gma-u.5	100808737	uncharacterized LOC100808737
gma-u.5	100793358	uncharacterized LOC100793358
vvi-u.5	100244442	uncharacterized LOC100244442
vvi-u.5	100241410	uncharacterized LOC100241410
ppo-u.5	7463380	uncharacterized LOC7463380
ppo-u.5	7488612	uncharacterized LOC7488612
mtr-u.5	25498170	uncharacterized LOC25498170
mtr-u.5	11442358	uncharacterized LOC11442358
sly-u.5	101268745	uncharacterized LOC101268745
sot-r.1	102585688	uncharacterized LOC102585688
sot-r.1	102590019	uncharacterized LOC102590019
nta-r.1	107767507	uncharacterized LOC107767507
nta-r.1	107783758	uncharacterized LOC107783758
nta-r.1	107804126	uncharacterized LOC107804126
osa-u.5	4324321	uncharacterized LOC4324321
zma-u.5	100276614	uncharacterized LOC100276614
tae-r.2	123063025	uncharacterized LOC123063025
tae-r.2	123071917	uncharacterized LOC123071917
tae-r.2	123075211	uncharacterized LOC123075211
hvu-r.1	123440671	uncharacterized LOC123440671
sbi-r.1	8056160	uncharacterized LOC8056160
sbi-r.1	8084044	uncharacterized LOC8084044
bdi-r.1	100834391	uncharacterized LOC100834391

Top 50 coexpressed genes to AT3G07470 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G07470 (ath-u.5 coexpression data)

CoexMap"819935"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0099503 [list] [network] secretory vesicle	(172 genes)	HDA
GO:0000325 [list] [network] plant-type vacuole	(788 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

Protein

NP_001326337.1 [sequence] [blastp]
NP_001326338.1 [sequence] [blastp]
NP_566308.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 2, E.R. 2, E.R._vacu 2	(predict for NP_001326337.1)
E.R. 3, extr 2, vacu 2, chlo 1, E.R._plas 1	(predict for NP_001326338.1)
E.R. 3, extr 2, vacu 2, chlo 1, E.R._plas 1	(predict for NP_566308.1)

Subcellular
localization
TargetP

scret 9	(predict for NP_001326337.1)
scret 9	(predict for NP_001326338.1)
scret 9	(predict for NP_566308.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G07470	ath-r.7 for AT3G07470	ath-m.9 for AT3G07470	ath-e.2 for AT3G07470	ath-m.4.bio for AT3G07470	ath-m.4.hor for AT3G07470	ath-m.4.lig for AT3G07470	ath-m.4.str for AT3G07470	ath-m.4.tis for AT3G07470	ath-u.5 for AT3G07460	ath-u.5 for AT5G16380	bra-r.6 for 103859222	bra-r.6 for 103837253	bra-r.6 for 103849295	bna-r.1 for 106389005	bna-r.1 for BNAA02G30190D	bna-r.1 for 111211005	ghi-r.1 for 107952760	ghi-r.1 for 107924473	ghi-r.1 for 107954977	cit-r.1 for 102623032	cit-r.1 for 102607361	gma-u.5 for 100812072	gma-u.5 for 100808737	gma-u.5 for 100793358	vvi-u.5 for 100244442	vvi-u.5 for 100241410	ppo-u.5 for 7463380	ppo-u.5 for 7488612	mtr-u.5 for 25498170	mtr-u.5 for 11442358	sly-u.5 for 101268745	sot-r.1 for 102585688	sot-r.1 for 102590019	nta-r.1 for 107767507	nta-r.1 for 107783758	nta-r.1 for 107804126	osa-u.5 for 4324321	zma-u.5 for 100276614	tae-r.2 for 123063025	tae-r.2 for 123071917	tae-r.2 for 123075211	hvu-r.1 for 123440671	sbi-r.1 for 8056160	sbi-r.1 for 8084044	bdi-r.1 for 100834391

Ortholog

Ortholog ID: 2808

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

transmembrane protein, putative (Protein of unknown function, DUF538)

autophagy-like protein, putative (Protein of unknown function, DUF538)

uncharacterized LOC103859222

uncharacterized LOC103837253

uncharacterized LOC103856192

uncharacterized LOC106389005

uncharacterized BNAA02G30190D

uncharacterized BNAC09G02440D

uncharacterized protein At5g01610

uncharacterized LOC121223788

uncharacterized LOC107895052

uncharacterized LOC102623032

uncharacterized LOC102607361

uncharacterized LOC100808737

uncharacterized LOC100793358

uncharacterized LOC100778787

uncharacterized LOC100244442

uncharacterized LOC100241410

uncharacterized LOC7463380

uncharacterized LOC7488612

uncharacterized LOC25498170

uncharacterized LOC11442358

uncharacterized LOC101268745

uncharacterized LOC102585688

uncharacterized LOC102590019

uncharacterized LOC107767507

uncharacterized LOC107783758

uncharacterized LOC107800360

uncharacterized LOC4324321

uncharacterized LOC100276614

uncharacterized LOC123063025

uncharacterized LOC123071917

uncharacterized LOC123075211

uncharacterized LOC123440671

uncharacterized LOC8056160

uncharacterized LOC8084044

uncharacterized LOC100834391

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	3
ath04142	Lysosome	3
ath04145	Phagosome	3
ath04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	5
bra04517	IgSF CAM signaling	5
bra04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2
ghi03013	Nucleocytoplasmic transport	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	4
ghi04382	Cornified envelope formation	4
ghi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	9
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6

Expression

Expression pattern

Entrez Gene ID^*

819935

819934

831499

103859222

103837253

103856192

106389005

106403332

106428168

107954977

121223788

107895052

102623032

102607361

100808737

100793358

100778787

100244442

100241410

7463380

7488612

25498170

11442358

101268745

102585688

102590019

107767507

107783758

107800360

4324321

100276614

123063025

123071917

123075211

123440671

8056160

8084044

100834391

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	3	2	3	2	2	2	1	2	3	1	1	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G07470 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G07470 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**