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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-r.7   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.9   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-e.2   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.4.bio   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.4.hor   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.4.lig   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.4.str   AT3G13120   Ribosomal protein S10p/S20e family protein 
 ath-m.4.tis   AT3G13120   Ribosomal protein S10p/S20e family protein 
 bra-r.6   103849785   30S ribosomal protein S10, chloroplastic 
 bra-r.6   103859498   30S ribosomal protein S10, chloroplastic-like 
 bna-r.1   106452340   30S ribosomal protein S10, chloroplastic 
 bna-r.1   106390483   30S ribosomal protein S10, chloroplastic 
 bna-r.1   106377514   30S ribosomal protein S10, chloroplastic 
 ghi-r.1   107886298   30S ribosomal protein S10, chloroplastic 
 ghi-r.1   107927175   30S ribosomal protein S10, chloroplastic 
 ghi-r.1   107921100   30S ribosomal protein S10, chloroplastic 
 cit-r.1   102615024   30S ribosomal protein S10, chloroplastic 
 gma-u.5   100306286   putative 30S ribosomal protein S10, chloroplastic 
 gma-u.5   100526953   uncharacterized LOC100526953 
 vvi-u.5   100248042   small ribosomal subunit protein uS10c 
 ppo-u.5   112323301   30S ribosomal protein S10, chloroplastic 
 ppo-u.5   7483645   30S ribosomal protein S10, chloroplastic 
 mtr-u.5   25489103   cyanelle 30S ribosomal protein S10 
 sly-u.5   101248722   small ribosomal subunit protein uS10c 
 sot-r.1   102600501   30S ribosomal protein S10, chloroplastic 
 nta-r.1   107817346   small ribosomal subunit protein uS10c-like 
 nta-r.1   107803063   small ribosomal subunit protein uS10c 
 zma-u.5   103632450   30S ribosomal protein S10, chloroplastic 
 sbi-r.1   8081886   30S ribosomal protein S10, chloroplastic 
 cre-r.1   CHLRE_03g195650v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G13120 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G13120 (ath-u.5 coexpression data)

CoexMap"820500"


athAT3G13120 | Entrez gene ID : 820500      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma sbi cre tae hvu bdi osa
Paralog 9 2 3 3 1 2 1 2 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (48 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001189875.1 [sequence] [blastp]
NP_001325784.1 [sequence] [blastp]
NP_187919.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001189875.1)
chlo 9  (predict for NP_001325784.1)
chlo 9  (predict for NP_187919.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001189875.1)
chlo 9  (predict for NP_001325784.1)
chlo 9  (predict for NP_187919.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G13120
ath-r.7
for
AT3G13120
ath-m.9
for
AT3G13120
ath-e.2
for
AT3G13120
ath-m.4.bio
for
AT3G13120
ath-m.4.hor
for
AT3G13120
ath-m.4.lig
for
AT3G13120
ath-m.4.str
for
AT3G13120
ath-m.4.tis
for
AT3G13120
bra-r.6
for
103849785
bra-r.6
for
103859498
bna-r.1
for
106452340
bna-r.1
for
106390483
bna-r.1
for
106377514
ghi-r.1
for
107886298
ghi-r.1
for
107927175
ghi-r.1
for
107921100
cit-r.1
for
102615024
gma-u.5
for
100306286
gma-u.5
for
100526953
vvi-u.5
for
100248042
ppo-u.5
for
112323301
ppo-u.5
for
7483645
mtr-u.5
for
25489103
sly-u.5
for
101248722
sot-r.1
for
102600501
nta-r.1
for
107817346
nta-r.1
for
107803063
zma-u.5
for
103632450
sbi-r.1
for
8081886
cre-r.1
for
CHLRE_03g195650v5


Ortholog ID: 7996
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta zma sbi cre
Symbol AT3G13120 LOC103849785 LOC103859498 LOC106452340 LOC106377514 LOC106402070 LOC107927175 LOC107921100 LOC107916868 LOC102615024 LOC100306286 LOC100526953 LOC100248042 LOC112323301 LOC7483645 LOC25489103 LOC101248722 LOC102600501 LOC107817346 LOC107803063 LOC103632450 LOC8081886 CHLRE_03g195650v5
Function* Ribosomal protein S10p/S20e family protein 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic-like 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic-like 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic putative 30S ribosomal protein S10, chloroplastic uncharacterized LOC100526953 small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic cyanelle 30S ribosomal protein S10 small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic small ribosomal subunit protein uS10c-like small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820500 103849785 103859498 106452340 106377514 106402070 107927175 107921100 107916868 102615024 100306286 100526953 100248042 112323301 7483645 25489103 101248722 102600501 107817346 107803063 103632450 8081886 5718747
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