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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8081886   30S ribosomal protein S10, chloroplastic 
 zma-u.5   103632450   30S ribosomal protein S10, chloroplastic 
 ath-u.5   AT3G13120   Ribosomal protein S10p/S20e family protein 
 gma-u.5   100306286   putative 30S ribosomal protein S10, chloroplastic 
 gma-u.5   100526953   uncharacterized LOC100526953 
 sly-u.5   101248722   small ribosomal subunit protein uS10c 
 vvi-u.5   100248042   small ribosomal subunit protein uS10c 
 ppo-u.5   112323301   30S ribosomal protein S10, chloroplastic 
 ppo-u.5   7483645   30S ribosomal protein S10, chloroplastic 
 mtr-u.5   25489103   cyanelle 30S ribosomal protein S10 

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Top 50 coexpressed genes to 8081886 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8081886 (sbi-r.1 coexpression data)

CoexMap"8081886"


sbiLOC8081886 | Entrez gene ID : 8081886    
Species sbi zma ath gma sly vvi ppo mtr bra nta osa cre cit hvu bdi sot tae bna ghi
Paralog 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (92 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021301982.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_021301982.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021301982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8081886

.
zma-u.5
for
103632450

.
ath-u.5
for
AT3G13120

.
gma-u.5
for
100306286

.
gma-u.5
for
100526953

.
sly-u.5
for
101248722

.
vvi-u.5
for
100248042

.
ppo-u.5
for
112323301

.
ppo-u.5
for
7483645

.
mtr-u.5
for
25489103

.


Ortholog ID: 7996
Species ath gma gma sly zma bra vvi ppo ppo mtr ghi ghi bna bna cre sbi sot cit nta nta
Symbol AT3G13120 LOC100526953 LOC100306286 LOC101248722 LOC103632450 LOC103859498 LOC100248042 LOC112323301 LOC7483645 LOC25489103 LOC107916868 LOC107927175 LOC106402070 LOC106377514 CHLRE_03g195650v5 LOC8081886 LOC102600501 LOC102615024 LOC107817346 LOC107803063
Function* Ribosomal protein S10p/S20e family protein uncharacterized LOC100526953 putative 30S ribosomal protein S10, chloroplastic small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic-like small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic cyanelle 30S ribosomal protein S10 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic-like 30S ribosomal protein S10, chloroplastic uncharacterized protein 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic small ribosomal subunit protein uS10c-like small ribosomal subunit protein uS10c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820500 100526953 100306286 101248722 103632450 103859498 100248042 112323301 7483645 25489103 107916868 107927175 106402070 106377514 5718747 8081886 102600501 102615024 107817346 107803063
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