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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916868   30S ribosomal protein S10, chloroplastic 
 ath-u.5   AT3G13120   Ribosomal protein S10p/S20e family protein 
 gma-u.5   100306286   putative 30S ribosomal protein S10, chloroplastic 
 gma-u.5   100526953   uncharacterized LOC100526953 
 vvi-u.5   100248042   small ribosomal subunit protein uS10c 
 ppo-u.5   112323301   30S ribosomal protein S10, chloroplastic 
 ppo-u.5   7483645   30S ribosomal protein S10, chloroplastic 
 mtr-u.5   25489103   cyanelle 30S ribosomal protein S10 
 sly-u.5   101248722   small ribosomal subunit protein uS10c 
 zma-u.5   103632450   30S ribosomal protein S10, chloroplastic 

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Top 50 coexpressed genes to 107916868 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916868 (ghi-r.1 coexpression data)

CoexMap"107916868"


ghiLOC107916868 | Entrez gene ID : 107916868    
Species ghi ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi osa sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (321 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016701727.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016701727.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016701727.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916868
ath-u.5
for
AT3G13120
gma-u.5
for
100306286
gma-u.5
for
100526953
vvi-u.5
for
100248042
ppo-u.5
for
112323301
ppo-u.5
for
7483645
mtr-u.5
for
25489103
sly-u.5
for
101248722
zma-u.5
for
103632450


Ortholog ID: 7996
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta zma sbi cre
Symbol LOC107916868 LOC107927175 AT3G13120 LOC103859498 LOC106402070 LOC106377514 LOC102615024 LOC100526953 LOC100306286 LOC100248042 LOC112323301 LOC7483645 LOC25489103 LOC101248722 LOC102600501 LOC107817346 LOC107803063 LOC103632450 LOC8081886 CHLRE_03g195650v5
Function* 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic Ribosomal protein S10p/S20e family protein 30S ribosomal protein S10, chloroplastic-like 30S ribosomal protein S10, chloroplastic-like 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic uncharacterized LOC100526953 putative 30S ribosomal protein S10, chloroplastic small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic cyanelle 30S ribosomal protein S10 small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic small ribosomal subunit protein uS10c-like small ribosomal subunit protein uS10c 30S ribosomal protein S10, chloroplastic 30S ribosomal protein S10, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916868 107927175 820500 103859498 106402070 106377514 102615024 100526953 100306286 100248042 112323301 7483645 25489103 101248722 102600501 107817346 107803063 103632450 8081886 5718747
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