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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G02270   Trimeric LpxA-like enzyme 
 ath-m.4.bio   AT3G02270   Trimeric LpxA-like enzyme 
 ath-m.4.hor   AT3G02270   Trimeric LpxA-like enzyme 
 ath-m.4.lig   AT3G02270   Trimeric LpxA-like enzyme 
 ath-m.4.str   AT3G02270   Trimeric LpxA-like enzyme 
 ath-m.4.tis   AT3G02270   Trimeric LpxA-like enzyme 
 ath-u.5   AT2G34970   Trimeric LpxA-like enzyme 
 ath-u.5   AT4G18300   Trimeric LpxA-like enzyme 
 gma-u.5   100788809   translation initiation factor eIF-2B subunit epsilon 
 gma-u.5   100784894   translation initiation factor eIF-2B subunit epsilon 
 vvi-u.5   100248224   uncharacterized LOC100248224 
 ppo-u.5   18098889   uncharacterized LOC18098889 
 mtr-u.5   25499712   translation initiation factor eIF-2B subunit epsilon 
 sly-u.5   101251037   uncharacterized LOC101251037 
 osa-u.5   4331104   uncharacterized LOC4331104 
 zma-u.5   100272405   Trimeric LpxA-like enzyme 

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Top 50 coexpressed genes to AT3G02270 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G02270 (ath-m.9 coexpression data)

CoexMap"821200"


athAT3G02270 | Entrez gene ID : 821200      
Species ath gma vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 8 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_186876.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_186876.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_186876.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G02270
ath-m.4.bio
for
AT3G02270
ath-m.4.hor
for
AT3G02270
ath-m.4.lig
for
AT3G02270
ath-m.4.str
for
AT3G02270
ath-m.4.tis
for
AT3G02270
ath-u.5
for
AT2G34970
ath-u.5
for
AT4G18300
gma-u.5
for
100788809
gma-u.5
for
100784894
vvi-u.5
for
100248224
ppo-u.5
for
18098889
mtr-u.5
for
25499712
sly-u.5
for
101251037
osa-u.5
for
4331104
zma-u.5
for
100272405


Ortholog ID: 6511
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu hvu sbi bdi cre
Symbol AT2G34970 AT4G18300 LOC103867403 LOC125600522 LOC125585105 LOC107895001 LOC107895031 LOC102608875 LOC100788809 LOC100248224 LOC18098889 LOC25499712 LOC101251037 LOC102582739 LOC107830039 LOC107767614 LOC4331104 LOC100272405 LOC123139590 LOC123119646 LOC123395386 LOC123401407 LOC8084691 LOC100823064 CHLRE_12g502200v5
Function* Trimeric LpxA-like enzyme Trimeric LpxA-like enzyme translation initiation factor eIF-2B subunit epsilon translation initiation factor eIF-2B subunit epsilon-like translation initiation factor eIF-2B subunit epsilon-like translation initiation factor eIF-2B subunit epsilon translation initiation factor eIF-2B subunit epsilon uncharacterized LOC102608875 translation initiation factor eIF-2B subunit epsilon uncharacterized LOC100248224 uncharacterized LOC18098889 translation initiation factor eIF-2B subunit epsilon uncharacterized LOC101251037 translation initiation factor eIF-2B subunit epsilon uncharacterized LOC107830039 uncharacterized LOC107767614 uncharacterized LOC4331104 Trimeric LpxA-like enzyme translation initiation factor eIF-2B subunit epsilon translation initiation factor eIF-2B subunit epsilon translation initiation factor eIF-2B subunit epsilon-like translation initiation factor eIF-2B subunit epsilon-like translation initiation factor eIF-2B subunit epsilon translation initiation factor eIF-2B subunit epsilon uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04142 Lysosome 3
gma04144 Endocytosis 3
gma05100 Bacterial invasion of epithelial cells 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818061 827556 103867403 125600522 125585105 107895001 107895031 102608875 100788809 100248224 18098889 25499712 101251037 102582739 107830039 107767614 4331104 100272405 123139590 123119646 123395386 123401407 8084691 100823064 66055491
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