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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-r.7   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.9   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-e.2   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.4.bio   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.4.hor   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.4.lig   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.4.str   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-m.4.tis   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   HON5   high mobility group A5 
 gma-u.5   AT-1SNBP   HMG I/Y like protein 
 gma-u.5   100802941   atherin 
 gma-u.5   100788215   atrophin-1 
 vvi-u.5   100853898   histone H1 
 ppo-u.5   7462486   uncharacterized LOC7462486 
 ppo-u.5   7493496   uncharacterized LOC7493496 
 mtr-u.5   25496745   translation initiation factor IF-2 
 mtr-u.5   11409630   bromodomain-containing protein 4 

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Top 50 coexpressed genes to HON4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HON4 (ath-u.5 coexpression data)

CoexMap"821328"


athHON4 | Entrez gene ID : 821328      
Species ath gma vvi ppo mtr bdi hvu bra cit bna sbi sly ghi osa sot nta cre tae zma
Paralog 10 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001325770.1 [sequence] [blastp]
NP_188431.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001325770.1)
nucl 9  (predict for NP_188431.3)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001325770.1)
other 7,  chlo 3  (predict for NP_188431.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HON4
ath-r.7
for
HON4
ath-m.9
for
HON4
ath-e.2
for
HON4
ath-m.4.bio
for
HON4
ath-m.4.hor
for
HON4
ath-m.4.lig
for
HON4
ath-m.4.str
for
HON4
ath-m.4.tis
for
HON4
ath-u.5
for
HON5
gma-u.5
for
AT-1SNBP
gma-u.5
for
100802941
gma-u.5
for
100788215
vvi-u.5
for
100853898
ppo-u.5
for
7462486
ppo-u.5
for
7493496
mtr-u.5
for
25496745
mtr-u.5
for
11409630


Ortholog ID: 11315
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr
Symbol HON5 HON4 LOC103868672 LOC103838863 LOC111215894 LOC106389056 LOC107946379 LOC107920096 LOC102616069 AT-1SNBP LOC100802941 LOC100853898 LOC7462486 LOC7493496 LOC25496745 LOC11409630
Function* high mobility group A5 winged-helix DNA-binding transcription factor family protein uncharacterized LOC103868672 histone H1 COPII coat assembly protein SEC16-like histone H1 formin-like protein 14 SH3 domain-containing protein C23A1.17 histone H1 HMG I/Y like protein atherin histone H1 uncharacterized LOC7462486 uncharacterized LOC7493496 translation initiation factor IF-2 bromodomain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03083 Polycomb repressive complex 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03018 RNA degradation 3
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841283 821328 103868672 103838863 111215894 106389056 107946379 107920096 102616069 547676 100802941 100853898 7462486 7493496 25496745 11409630
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