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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   LARP6c   RNA-binding protein 
 ath-m.4.bio   LARP6c   RNA-binding protein 
 ath-m.4.hor   LARP6c   RNA-binding protein 
 ath-m.4.lig   LARP6c   RNA-binding protein 
 ath-m.4.str   LARP6c   RNA-binding protein 
 ath-m.4.tis   LARP6c   RNA-binding protein 
 vvi-u.5   100241743   la-related protein 6C 
 mtr-u.5   11444117   la-related protein 6C 
 sly-u.5   101249591   la-related protein 6C-like 

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Top 50 coexpressed genes to LARP6c (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LARP6c (ath-m.9 coexpression data)

CoexMap"821444"


athLARP6c | Entrez gene ID : 821444      
Species ath vvi mtr sly bdi hvu bra cit gma bna ppo sbi ghi osa sot nta cre tae zma
Paralog 6 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010183 [list] [network] pollen tube guidance  (50 genes)  IMP  
GO:0009846 [list] [network] pollen germination  (77 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (588 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (353 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0048027 [list] [network] mRNA 5'-UTR binding  (6 genes)  IDA  
Protein NP_001325674.1 [sequence] [blastp]
NP_188540.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  cyto 2,  vacu 2,  nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_001325674.1)
nucl 7,  pero 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for NP_188540.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001325674.1)
other 8  (predict for NP_188540.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
LARP6c
ath-m.4.bio
for
LARP6c
ath-m.4.hor
for
LARP6c
ath-m.4.lig
for
LARP6c
ath-m.4.str
for
LARP6c
ath-m.4.tis
for
LARP6c
vvi-u.5
for
100241743
mtr-u.5
for
11444117
sly-u.5
for
101249591


Ortholog ID: 4729
Species bna bna vvi mtr sly nta nta tae tae hvu
Symbol LOC125604362 LOC106345229 LOC100241743 LOC11444117 LOC101249591 LOC107827035 LOC107826272 LOC123045153 LOC123188797 LOC123426380
Function* la-related protein 6C-like la-related protein 6C la-related protein 6C la-related protein 6C la-related protein 6C-like la-related protein 6C-like la-related protein 6C-like la-related protein 6C la-related protein 6C la-related protein 6C-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125604362 106345229 100241743 11444117 101249591 107827035 107826272 123045153 123188797 123426380
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