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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATM1   myosin 1 
 ath-r.7   ATM1   myosin 1 
 ath-m.9   ATM1   myosin 1 
 ath-e.2   ATM1   myosin 1 
 ath-m.4.bio   ATM1   myosin 1 
 ath-m.4.hor   ATM1   myosin 1 
 ath-m.4.lig   ATM1   myosin 1 
 ath-m.4.str   ATM1   myosin 1 
 ath-m.4.tis   ATM1   myosin 1 
 ath-u.5   VIIIB   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   ATM2   myosin 2 
 ath-u.5   VIIIA   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100801876   myosin-12 
 gma-u.5   100796845   myosin-7 
 gma-u.5   100802074   myosin-2 
 vvi-u.5   100241905   myosin-2 
 vvi-u.5   100254832   myosin-1 
 ppo-u.5   7486359   myosin-1 
 ppo-u.5   7457168   myosin-1 
 ppo-u.5   18095652   myosin-2 
 mtr-u.5   11424673   myosin-1 
 mtr-u.5   25491221   uncharacterized LOC25491221 
 mtr-u.5   25482851   myosin-1 
 sly-u.5   101267827   myosin-2-like 
 sly-u.5   101246187   myosin-2-like 
 sly-u.5   101253239   myosin-1 
 osa-u.5   4348961   myosin-1 
 osa-u.5   4343605   myosin-1 
 zma-u.5   100277427   uncharacterized LOC100277427 
 zma-u.5   103647272   myosin-3 
 zma-u.5   103634337   myosin-1 

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Top 50 coexpressed genes to ATM1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATM1 (ath-u.5 coexpression data)

CoexMap"821534"


athATM1 | Entrez gene ID : 821534      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 12 3 2 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030048 [list] [network] actin filament-based movement  (22 genes)  TAS  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IMP  
GO CC
GO:0009504 [list] [network] cell plate  (43 genes)  HDA IDA  
GO:0009524 [list] [network] phragmoplast  (72 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003774 [list] [network] cytoskeletal motor activity  (44 genes)  ISS  
Protein NP_001154628.2 [sequence] [blastp]
NP_001325652.1 [sequence] [blastp]
NP_001325653.1 [sequence] [blastp]
NP_001325654.1 [sequence] [blastp]
NP_188630.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  vacu 1,  cysk 1,  golg 1,  chlo_mito 1  (predict for NP_001154628.2)
plas 6,  nucl 1,  vacu 1,  mito 1,  golg 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1  (predict for NP_001325652.1)
nucl 3,  cyto_nucl 3,  chlo 2,  cyto 1,  vacu 1,  E.R. 1,  cysk 1,  golg 1,  E.R._vacu 1  (predict for NP_001325653.1)
nucl 3,  cyto_nucl 3,  chlo 2,  cyto 1,  vacu 1,  E.R. 1,  cysk 1,  golg 1,  E.R._vacu 1  (predict for NP_001325654.1)
nucl 3,  cyto_nucl 3,  chlo 2,  cyto 1,  vacu 1,  E.R. 1,  cysk 1,  golg 1,  E.R._vacu 1  (predict for NP_188630.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001154628.2)
chlo 5  (predict for NP_001325652.1)
chlo 5  (predict for NP_001325653.1)
chlo 5  (predict for NP_001325654.1)
chlo 5  (predict for NP_188630.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATM1
ath-r.7
for
ATM1
ath-m.9
for
ATM1
ath-e.2
for
ATM1
ath-m.4.bio
for
ATM1
ath-m.4.hor
for
ATM1
ath-m.4.lig
for
ATM1
ath-m.4.str
for
ATM1
ath-m.4.tis
for
ATM1
ath-u.5
for
VIIIB
ath-u.5
for
ATM2
ath-u.5
for
VIIIA
gma-u.5
for
100801876
gma-u.5
for
100796845
gma-u.5
for
100802074
vvi-u.5
for
100241905
vvi-u.5
for
100254832
ppo-u.5
for
7486359
ppo-u.5
for
7457168
ppo-u.5
for
18095652
mtr-u.5
for
11424673
mtr-u.5
for
25491221
mtr-u.5
for
25482851
sly-u.5
for
101267827
sly-u.5
for
101246187
sly-u.5
for
101253239
osa-u.5
for
4348961
osa-u.5
for
4343605
zma-u.5
for
100277427
zma-u.5
for
103647272
zma-u.5
for
103634337


Ortholog ID: 1150
Species ath ath bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol ATM1 VIIIB LOC103844886 LOC125599269 LOC106425131 LOC107919879 LOC107886881 LOC102621697 LOC102625476 LOC100802074 LOC100782618 LOC100254832 LOC100241905 LOC18095652 LOC7457168 LOC25491221 LOC25502561 LOC101267827 LOC101253239 LOC102585099 LOC102601244 LOC107806983 LOC107765078 LOC4348961 LOC4343605 LOC103647272 LOC103634337 LOC543045 LOC123181144 LOC123432090 LOC123425699 LOC8067384 LOC8081749 LOC100825630 LOC100828969 CHLRE_09g416250v5
Function* myosin 1 P-loop containing nucleoside triphosphate hydrolases superfamily protein myosin-2 myosin-1-like myosin-1 myosin-1 myosin-1 myosin-1 myosin-2 myosin-2 myosin-23 myosin-1 myosin-2 myosin-2 myosin-1 uncharacterized LOC25491221 myosin-2 myosin-2-like myosin-1 myosin-2-like myosin-1 myosin-1-like myosin-2 myosin-1 myosin-1 myosin-3 myosin-1 myosin-3 myosin-1 myosin-1-like myosin-3-like myosin-1 myosin-3 myosin-1 myosin-3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 13
bra00360 Phenylalanine metabolism 4
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bra00941 Flavonoid biosynthesis 4
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 6
gma04814 Motor proteins 6
gma04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta04814 Motor proteins 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
zma00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae04016 MAPK signaling pathway - plant 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821534 828845 103844886 125599269 106425131 107919879 107886881 102621697 102625476 100802074 100782618 100254832 100241905 18095652 7457168 25491221 25502561 101267827 101253239 102585099 102601244 107806983 107765078 4348961 4343605 103647272 103634337 543045 123181144 123432090 123425699 8067384 8081749 100825630 100828969 5722381
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