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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.bio   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.hor   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.lig   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.str   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.tis   AT3G23270   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 bra-r.6   103828885   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103836061   PH, RCC1 and FYVE domains-containing protein 1 
 bna-r.1   106421426   PH, RCC1 and FYVE domains-containing protein 1-like 
 ghi-r.1   121213714   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   121206384   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107933115   PH, RCC1 and FYVE domains-containing protein 1 
 cit-r.1   102629726   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100776643   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   11425711   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   11432556   PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5   4326924   PH, RCC1 and FYVE domains-containing protein 1 
 zma-u.5   100273718   putative regulator of chromosome condensation (RCC1) family protein 
 zma-u.5   103630677   Putative regulator of chromosome condensation (RCC1) family protein 
 tae-r.2   123065658   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123182862   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123143154   PH, RCC1 and FYVE domains-containing protein 1 
 hvu-r.1   123447901   PH, RCC1 and FYVE domains-containing protein 1-like 
 sbi-r.1   8059145   uncharacterized LOC8059145 
 sbi-r.1   8069001   probable E3 ubiquitin-protein ligase HERC2 
 bdi-r.1   100827763   PH, RCC1 and FYVE domains-containing protein 1 

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Top 50 coexpressed genes to AT3G23270 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G23270 (ath-m.9 coexpression data)

CoexMap"821906"


athAT3G23270 | Entrez gene ID : 821906      
Species ath bra bna ghi cit gma mtr osa zma tae hvu sbi bdi cre ppo sly sot nta vvi
Paralog 6 2 1 3 1 1 2 1 2 3 1 2 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007165 [list] [network] signal transduction  (1102 genes)  ISS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0035091 [list] [network] phosphatidylinositol binding  (93 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (945 genes)  IEA  
Protein NP_001327882.1 [sequence] [blastp]
NP_188968.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001327882.1)
nucl 10  (predict for NP_188968.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327882.1)
other 8  (predict for NP_188968.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G23270
ath-m.4.bio
for
AT3G23270
ath-m.4.hor
for
AT3G23270
ath-m.4.lig
for
AT3G23270
ath-m.4.str
for
AT3G23270
ath-m.4.tis
for
AT3G23270
bra-r.6
for
103828885
bra-r.6
for
103836061
bna-r.1
for
106421426
ghi-r.1
for
121213714
ghi-r.1
for
121206384
ghi-r.1
for
107933115
cit-r.1
for
102629726
gma-u.5
for
100776643
mtr-u.5
for
11425711
mtr-u.5
for
11432556
osa-u.5
for
4326924
zma-u.5
for
100273718
zma-u.5
for
103630677
tae-r.2
for
123065658
tae-r.2
for
123182862
tae-r.2
for
123143154
hvu-r.1
for
123447901
sbi-r.1
for
8059145
sbi-r.1
for
8069001
bdi-r.1
for
100827763


Ortholog ID: 4918
Species bra bra ghi ghi ghi cit gma mtr mtr osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC103828885 LOC103836061 LOC121213714 LOC121206384 LOC107928990 LOC102629726 LOC100779684 LOC11425711 LOC11432556 LOC4326924 LOC100273718 LOC103630677 LOC123065658 LOC123182862 LOC123143154 LOC123447901 LOC8059145 LOC8069001 LOC100827763
Function* PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 putative regulator of chromosome condensation (RCC1) family protein Putative regulator of chromosome condensation (RCC1) family protein PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like uncharacterized LOC8059145 probable E3 ubiquitin-protein ligase HERC2 PH, RCC1 and FYVE domains-containing protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00260 Glycine, serine and threonine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00270 Cysteine and methionine metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
zma00052 Galactose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00564 Glycerophospholipid metabolism 2
tae00565 Ether lipid metabolism 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae04814 Motor proteins 3
tae00561 Glycerolipid metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103828885 103836061 121213714 121206384 107928990 102629726 100779684 11425711 11432556 4326924 100273718 103630677 123065658 123182862 123143154 123447901 8059145 8069001 100827763
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