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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G28370   spindle assembly checkpoint component 
 ath-r.7   AT3G28370   spindle assembly checkpoint component 
 ath-e.2   AT3G28370   spindle assembly checkpoint component 
 ath-u.5   AT1G51430   cTAGE family protein 
 bra-r.6   117125616   uncharacterized LOC117125616 
 bra-r.6   103875155   cTAGE family member 4 
 bna-r.1   106415154   cTAGE family member 4 
 bna-r.1   106430470   cTAGE family member 8 
 ppo-u.5   7495933   uncharacterized LOC7495933 
 ppo-u.5   7487848   uncharacterized LOC7487848 
 mtr-u.5   25497990   uncharacterized LOC25497990 
 nta-r.1   107826783   uncharacterized LOC107826783 
 nta-r.1   107788503   uncharacterized LOC107788503 
 osa-u.5   9270963   uncharacterized LOC9270963 
 osa-u.5   107277321   uncharacterized LOC107277321 
 tae-r.2   123152441   uncharacterized LOC123152441 
 tae-r.2   123164639   uncharacterized LOC123164639 
 hvu-r.1   123398824   uncharacterized LOC123398824 
 bdi-r.1   100830306   uncharacterized LOC100830306 
 bdi-r.1   100824651   uncharacterized LOC100824651 

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Top 50 coexpressed genes to AT3G28370 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G28370 (ath-u.5 coexpression data)

CoexMap"822466"


athAT3G28370 | Entrez gene ID : 822466      
Species ath bra bna ppo mtr nta osa tae hvu bdi sot vvi sly zma cre sbi gma ghi cit
Paralog 4 2 2 2 1 2 2 2 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007130 [list] [network] synaptonemal complex assembly  (7 genes)  IGI  
GO CC
GO:0000801 [list] [network] central element  (2 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001326654.1 [sequence] [blastp]
NP_001326655.1 [sequence] [blastp]
NP_001326656.1 [sequence] [blastp]
NP_001326657.1 [sequence] [blastp]
NP_189478.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  chlo_mito 2,  nucl_plas 1,  cyto_pero 1  (predict for NP_001326654.1)
chlo 4,  cyto 2,  chlo_mito 2,  nucl_plas 1,  cyto_pero 1  (predict for NP_001326655.1)
chlo 4,  cyto 4,  nucl 1,  mito 1,  extr 1,  pero 1  (predict for NP_001326656.1)
chlo 4,  cyto 2,  chlo_mito 2,  nucl_plas 1,  cyto_pero 1  (predict for NP_001326657.1)
chlo 4,  cyto 4,  nucl 1,  mito 1,  extr 1,  pero 1  (predict for NP_189478.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001326654.1)
other 5  (predict for NP_001326655.1)
other 5  (predict for NP_001326656.1)
other 5  (predict for NP_001326657.1)
other 5  (predict for NP_189478.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G28370
ath-r.7
for
AT3G28370
ath-e.2
for
AT3G28370
ath-u.5
for
AT1G51430
bra-r.6
for
117125616
bra-r.6
for
103875155
bna-r.1
for
106415154
bna-r.1
for
106430470
ppo-u.5
for
7495933
ppo-u.5
for
7487848
mtr-u.5
for
25497990
nta-r.1
for
107826783
nta-r.1
for
107788503
osa-u.5
for
9270963
osa-u.5
for
107277321
tae-r.2
for
123152441
tae-r.2
for
123164639
hvu-r.1
for
123398824
bdi-r.1
for
100830306
bdi-r.1
for
100824651


Ortholog ID: 6574
Species ath ath bra bra bna bna ppo ppo mtr nta nta osa osa tae tae bdi bdi
Symbol AT3G28370 AT1G51430 LOC117125616 LOC103875155 LOC106415154 LOC106430470 LOC7495933 LOC7487848 LOC25497990 LOC107826783 LOC107788503 LOC9270963 LOC107277321 LOC123152441 LOC123164639 LOC100830306 LOC100824651
Function* spindle assembly checkpoint component cTAGE family protein uncharacterized LOC117125616 cTAGE family member 4 cTAGE family member 4 cTAGE family member 8 uncharacterized LOC7495933 uncharacterized LOC7487848 uncharacterized LOC25497990 uncharacterized LOC107826783 uncharacterized LOC107788503 uncharacterized LOC9270963 uncharacterized LOC107277321 uncharacterized LOC123152441 uncharacterized LOC123164639 uncharacterized LOC100830306 uncharacterized LOC100824651
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta03040 Spliceosome 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03050 Proteasome 2
nta03030 DNA replication 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa04141 Protein processing in endoplasmic reticulum 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822466 841568 117125616 103875155 106415154 106430470 7495933 7487848 25497990 107826783 107788503 9270963 107277321 123152441 123164639 100830306 100824651
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