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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G52050   5'-3' exonuclease family protein 
 ath-r.7   AT3G52050   5'-3' exonuclease family protein 
 ath-e.2   AT3G52050   5'-3' exonuclease family protein 
 bra-r.6   103841138   flap endonuclease Xni 
 bna-r.1   106367855   DNA polymerase I 
 bna-r.1   106402677   DNA polymerase I 
 ghi-r.1   107910270   DNA polymerase I 
 ghi-r.1   107950998   DNA polymerase I 
 cit-r.1   102609974   uncharacterized LOC102609974 
 gma-u.5   100811786   DNA polymerase I, thermostable 
 gma-u.5   100792557   flap endonuclease Xni 
 vvi-u.5   100242452   uncharacterized LOC100242452 
 ppo-u.5   18104577   uncharacterized LOC18104577 
 mtr-u.5   11445111   DNA polymerase I, thermostable 
 sly-u.5   101265105   uncharacterized LOC101265105 
 sot-r.1   102600473   DNA polymerase I 
 nta-r.1   107832360   uncharacterized LOC107832360 
 nta-r.1   107796316   uncharacterized LOC107796316 
 osa-u.5   4332131   uncharacterized LOC4332131 
 zma-u.5   100285516   DNA polymerase I 
 tae-r.2   123092866   DNA polymerase I 
 tae-r.2   123085251   DNA polymerase I 
 tae-r.2   123098152   DNA polymerase I 
 hvu-r.1   123449230   DNA polymerase I 
 sbi-r.1   8056844   flap endonuclease Xni 
 bdi-r.1   100837000   DNA polymerase I 
 cre-r.1   CHLRE_03g205809v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G52050 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G52050 (ath-u.5 coexpression data)

CoexMap"824368"


athAT3G52050 | Entrez gene ID : 824368      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0033567 [list] [network] DNA replication, Okazaki fragment processing  (2 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0017108 [list] [network] 5'-flap endonuclease activity  (5 genes)  IEA  
GO:0008409 [list] [network] 5'-3' exonuclease activity  (7 genes)  IEA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (9 genes)  IEA  
Protein NP_001078270.1 [sequence] [blastp]
NP_001078271.1 [sequence] [blastp]
NP_001154673.1 [sequence] [blastp]
NP_001327828.1 [sequence] [blastp]
NP_001327829.1 [sequence] [blastp]
NP_001327830.1 [sequence] [blastp]
NP_190773.2 [sequence] [blastp]
NP_974414.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001078270.1)
chlo 6,  mito 3,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001078271.1)
chlo 4,  cyto 2,  vacu 2,  chlo_mito 2  (predict for NP_001154673.1)
chlo 6,  mito 3,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001327828.1)
chlo 5,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001327829.1)
chlo 6,  mito 3,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001327830.1)
chlo 6,  mito 4  (predict for NP_190773.2)
chlo 6,  mito 4  (predict for NP_974414.2)
Subcellular
localization
TargetP
mito 2  (predict for NP_001078270.1)
mito 9  (predict for NP_001078271.1)
mito 2  (predict for NP_001154673.1)
mito 9  (predict for NP_001327828.1)
mito 2  (predict for NP_001327829.1)
mito 9  (predict for NP_001327830.1)
mito 9  (predict for NP_190773.2)
mito 9  (predict for NP_974414.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G52050
ath-r.7
for
AT3G52050
ath-e.2
for
AT3G52050
bra-r.6
for
103841138
bna-r.1
for
106367855
bna-r.1
for
106402677
ghi-r.1
for
107910270
ghi-r.1
for
107950998
cit-r.1
for
102609974
gma-u.5
for
100811786
gma-u.5
for
100792557
vvi-u.5
for
100242452
ppo-u.5
for
18104577
mtr-u.5
for
11445111
sly-u.5
for
101265105
sot-r.1
for
102600473
nta-r.1
for
107832360
nta-r.1
for
107796316
osa-u.5
for
4332131
zma-u.5
for
100285516
tae-r.2
for
123092866
tae-r.2
for
123085251
tae-r.2
for
123098152
hvu-r.1
for
123449230
sbi-r.1
for
8056844
bdi-r.1
for
100837000
cre-r.1
for
CHLRE_03g205809v5


Ortholog ID: 10145
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G52050 LOC103841138 LOC106367855 LOC106402677 LOC107910270 LOC107950998 LOC102609974 LOC100811786 LOC100792557 LOC100242452 LOC18104577 LOC11445111 LOC101265105 LOC102600473 LOC107832360 LOC107796316 LOC4332131 LOC100285516 LOC123092866 LOC123085251 LOC123098152 LOC123449230 LOC8056844 LOC100837000 CHLRE_03g205809v5
Function* 5'-3' exonuclease family protein flap endonuclease Xni DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I uncharacterized LOC102609974 DNA polymerase I, thermostable flap endonuclease Xni uncharacterized LOC100242452 uncharacterized LOC18104577 DNA polymerase I, thermostable uncharacterized LOC101265105 DNA polymerase I uncharacterized LOC107832360 uncharacterized LOC107796316 uncharacterized LOC4332131 DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I flap endonuclease Xni DNA polymerase I uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00020 Citrate cycle (TCA cycle) 2
cit00620 Pyruvate metabolism 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04981 Folate transport and metabolism 2
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae03410 Base excision repair 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00260 Glycine, serine and threonine metabolism 2
bdi00290 Valine, leucine and isoleucine biosynthesis 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824368 103841138 106367855 106402677 107910270 107950998 102609974 100811786 100792557 100242452 18104577 11445111 101265105 102600473 107832360 107796316 4332131 100285516 123092866 123085251 123098152 123449230 8056844 100837000 5724942
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