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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.bio   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.hor   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.lig   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.str   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.tis   AT3G59940   Galactose oxidase/kelch repeat superfamily protein 
 gma-u.5   100782813   F-box/kelch-repeat protein At1g15670 
 vvi-u.5   100262356   F-box/kelch-repeat protein At2g44130 
 vvi-u.5   100250782   F-box/kelch-repeat protein SKIP20 
 ppo-u.5   7484599   F-box/kelch-repeat protein SKIP20 
 ppo-u.5   7461367   F-box/kelch-repeat protein At2g44130 
 mtr-u.5   11419026   F-box/kelch-repeat protein At2g44130 
 sly-u.5   101266280   F-box/kelch-repeat protein At1g15670 
 osa-u.5   4350190   F-box/kelch-repeat protein At2g44130 
 zma-u.5   100383172   F-box/kelch-repeat protein SKIP20 

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Top 50 coexpressed genes to AT3G59940 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G59940 (ath-m.9 coexpression data)

CoexMap"825164"


athAT3G59940 | Entrez gene ID : 825164      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 6 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080037 [list] [network] negative regulation of cytokinin-activated signaling pathway  (6 genes)  IGI  
GO:2000762 [list] [network] regulation of phenylpropanoid metabolic process  (29 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_191553.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_191553.1)
Subcellular
localization
TargetP
other 7  (predict for NP_191553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G59940

.
ath-m.4.bio
for
AT3G59940

.
ath-m.4.hor
for
AT3G59940

.
ath-m.4.lig
for
AT3G59940

.
ath-m.4.str
for
AT3G59940

.
ath-m.4.tis
for
AT3G59940

.
gma-u.5
for
100782813

.
vvi-u.5
for
100262356

.
vvi-u.5
for
100250782

.
ppo-u.5
for
7484599

.
ppo-u.5
for
7461367

.
mtr-u.5
for
11419026

.
sly-u.5
for
101266280

.
osa-u.5
for
4350190

.
zma-u.5
for
100383172

.


Ortholog ID: 3323
Species gma sly osa zma bra bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol LOC100782813 LOC101266280 LOC4350190 LOC100383172 LOC103841849 LOC103866770 LOC100250782 LOC100262356 LOC7455621 LOC11419026 LOC123091211 LOC123091213 LOC123447831 LOC123451168 LOC107889477 LOC107893876 LOC106396700 LOC106438210 CHLRE_03g205400v5 LOC8057145 LOC8076911 LOC102600264 LOC102626613 LOC102629764 LOC100845333 LOC100845633 LOC107797281 LOC107775293
Function* F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein SKIP20 F-box/kelch-repeat protein SKIP20 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein SKIP20 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At2g44130-like F-box/kelch-repeat protein At2g44130-like F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At2g44130-like F-box/kelch-repeat protein At2g44130-like uncharacterized protein F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At1g15670-like F-box/kelch-repeat protein At1g80440-like F-box/kelch-repeat protein SKIP20 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At2g44130 F-box/kelch-repeat protein At1g15670 F-box/kelch-repeat protein At1g15670-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00380 Tryptophan metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
hvu00460 Cyanoamino acid metabolism 2
hvu00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit00904 Diterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782813 101266280 4350190 100383172 103841849 103866770 100250782 100262356 7455621 11419026 123091211 123091213 123447831 123451168 107889477 107893876 106396700 106438210 66053042 8057145 8076911 102600264 102626613 102629764 100845333 100845633 107797281 107775293
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