ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-r.7	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.9	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-e.2	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.4.bio	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.4.hor	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.4.lig	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.4.str	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
ath-m.4.tis	TT8	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
gma-u.5	100807157	basic helix-loop-helix protein A
vvi-u.5	MYC1	bHLH-like DNA binding protein
ppo-u.5	7468710	transcription factor BHLH42
ppo-u.5	18099644	transcription factor BHLH42
mtr-u.5	11429566	basic helix-loop-helix protein A
sly-u.5	101254527	bHLH transcription factor AH

Annotation

functional annotation

KEGG

GO BP

GO:2000029 [list] [network] regulation of proanthocyanidin biosynthetic process	(3 genes)	IEP
GO:0031542 [list] [network] positive regulation of anthocyanin biosynthetic process	(4 genes)	IMP
GO:0009962 [list] [network] regulation of flavonoid biosynthetic process	(31 genes)	TAS
GO:0010214 [list] [network] seed coat development	(51 genes)	IMP
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway	(74 genes)	IMP
GO:0010026 [list] [network] trichome differentiation	(86 genes)	IMP
GO:0048316 [list] [network] seed development	(775 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0046983 [list] [network] protein dimerization activity	(446 genes)	IEA
GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IDA IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_192720.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1

(predict for NP_192720.2)

Subcellular
localization
TargetP

other 9

(predict for NP_192720.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for TT8 .	ath-r.7 for TT8 .	ath-m.9 for TT8 .	ath-e.2 for TT8 .	ath-m.4.bio for TT8 .	ath-m.4.hor for TT8 .	ath-m.4.lig for TT8 .	ath-m.4.str for TT8 .	ath-m.4.tis for TT8 .	gma-u.5 for 100807157 .	vvi-u.5 for MYC1 .	ppo-u.5 for 7468710 .	ppo-u.5 for 18099644 .	mtr-u.5 for 11429566 .	sly-u.5 for 101254527 .