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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CPR1   F-box and associated interaction domains-containing protein 
 ath-r.7   CPR1   F-box and associated interaction domains-containing protein 
 ath-e.2   CPR1   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G06240   F-box family protein 
 ath-u.5   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G23880   F-box and associated interaction domains-containing protein 
 gma-u.5   102666879   F-box/kelch-repeat protein At3g06240 
 ppo-u.5   7454236   F-box/kelch-repeat protein At3g23880 
 ppo-u.5   7455978   F-box protein At3g07870 
 mtr-u.5   120580159   F-box/kelch-repeat protein At3g06240 
 sly-u.5   101260412   F-box/kelch-repeat protein At3g06240 

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Top 50 coexpressed genes to CPR1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CPR1 (ath-u.5 coexpression data)

CoexMap"826869"


athCPR1 | Entrez gene ID : 826869      
Species ath gma ppo mtr sly bdi hvu bra vvi cit bna sbi ghi osa sot nta cre tae zma
Paralog 6 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042177 [list] [network] negative regulation of protein catabolic process  (3 genes)  IMP  
GO:0031348 [list] [network] negative regulation of defense response  (78 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078377.1 [sequence] [blastp]
NP_001328191.1 [sequence] [blastp]
NP_192993.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1  (predict for NP_001078377.1)
chlo 4,  nucl 4,  cyto 1  (predict for NP_001328191.1)
chlo 4,  nucl 4,  cyto 1  (predict for NP_192993.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001078377.1)
other 5  (predict for NP_001328191.1)
other 5  (predict for NP_192993.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CPR1
ath-r.7
for
CPR1
ath-e.2
for
CPR1
ath-u.5
for
AT3G06240
ath-u.5
for
AT3G07870
ath-u.5
for
AT3G23880
gma-u.5
for
102666879
ppo-u.5
for
7454236
ppo-u.5
for
7455978
mtr-u.5
for
120580159
sly-u.5
for
101260412


Ortholog ID: 25
Species ath ath bna ghi gma gma mtr sly sot nta nta bdi
Symbol AT3G07870 AT3G06240 LOC106388992 LOC107888906 LOC100789250 LOC100789763 LOC25483269 LOC101244418 LOC107062273 LOC107824897 LOC107792385 LOC100823474
Function* F-box and associated interaction domains-containing protein F-box family protein F-box protein At3g07870-like F-box/kelch-repeat protein At3g06240 putative F-box protein F-box protein CPR1 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g06240-like F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/LRR-repeat protein At2g43260
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna00480 Glutathione metabolism 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819978 819798 106388992 107888906 100789250 100789763 25483269 101244418 107062273 107824897 107792385 100823474
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