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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G13540   golgin family A protein 
 ath-r.7   AT4G13540   golgin family A protein 
 ath-e.2   AT4G13540   golgin family A protein 
 ath-u.5   AT3G23930   troponin T, skeletal protein 
 bra-r.6   103863625   uncharacterized LOC103863625 
 bra-r.6   103828654   golgin subfamily A member 6-like protein 2 
 bna-r.1   106378186   golgin subfamily A member 6-like protein 2 
 bna-r.1   106385529   uncharacterized LOC106385529 
 bna-r.1   106426994   uncharacterized LOC106426994 
 ghi-r.1   107890596   uncharacterized LOC107890596 
 ghi-r.1   107935213   uncharacterized LOC107935213 
 cit-r.1   102625890   uncharacterized LOC102625890 
 gma-u.5   100815580   uncharacterized protein PF11_0207 
 gma-u.5   100804745   uncharacterized LOC100804745 
 gma-u.5   100306230   uncharacterized LOC100306230 
 ppo-u.5   7494765   uncharacterized LOC7494765 
 ppo-u.5   7477014   uncharacterized LOC7477014 
 mtr-u.5   25483033   probable DNA double-strand break repair Rad50 ATPase 
 sly-u.5   101265866   uncharacterized LOC101265866 
 sly-u.5   101267009   uncharacterized LOC101267009 
 sot-r.1   102594551   golgin subfamily A member 1-like 
 sot-r.1   102586432   golgin subfamily A member 6-like protein 2 
 nta-r.1   107797676   uncharacterized LOC107797676 
 nta-r.1   107805530   uncharacterized LOC107805530 
 nta-r.1   107807644   uncharacterized LOC107807644 

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Top 50 coexpressed genes to AT4G13540 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G13540 (ath-u.5 coexpression data)

CoexMap"826986"


athAT4G13540 | Entrez gene ID : 826986      
Species ath bra bna ghi cit gma ppo mtr sly sot nta sbi osa tae hvu vvi zma cre bdi
Paralog 4 2 3 2 1 3 2 1 2 2 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061692 [list] [network] cellular detoxification of hydrogen peroxide  (1 genes)  IMP  
GO:0120196 [list] [network] negative regulation of anther dehiscence  (1 genes)  IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (313 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_193090.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  plas 1,  mito_plas 1  (predict for NP_193090.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_193090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G13540
ath-r.7
for
AT4G13540
ath-e.2
for
AT4G13540
ath-u.5
for
AT3G23930
bra-r.6
for
103863625
bra-r.6
for
103828654
bna-r.1
for
106378186
bna-r.1
for
106385529
bna-r.1
for
106426994
ghi-r.1
for
107890596
ghi-r.1
for
107935213
cit-r.1
for
102625890
gma-u.5
for
100815580
gma-u.5
for
100804745
gma-u.5
for
100306230
ppo-u.5
for
7494765
ppo-u.5
for
7477014
mtr-u.5
for
25483033
sly-u.5
for
101265866
sly-u.5
for
101267009
sot-r.1
for
102594551
sot-r.1
for
102586432
nta-r.1
for
107797676
nta-r.1
for
107805530
nta-r.1
for
107807644


Ortholog ID: 9505
Species ath ath bra bra bna bna bna ghi ghi cit gma gma gma ppo ppo mtr sly sly sot sot nta nta nta
Symbol AT4G13540 AT3G23930 LOC103863625 LOC103828654 LOC106385529 LOC106426994 LOC106454473 LOC107890596 LOC107935213 LOC102625890 LOC100815580 LOC100804745 LOC100306230 LOC7494765 LOC7477014 LOC25483033 LOC101265866 LOC101267009 LOC102594551 LOC102586432 LOC107805530 LOC107807644 LOC107783712
Function* golgin family A protein troponin T, skeletal protein uncharacterized LOC103863625 golgin subfamily A member 6-like protein 2 uncharacterized LOC106385529 uncharacterized LOC106426994 golgin subfamily A member 6-like protein 2 uncharacterized LOC107890596 uncharacterized LOC107935213 uncharacterized LOC102625890 uncharacterized protein PF11_0207 uncharacterized LOC100804745 uncharacterized LOC100306230 uncharacterized LOC7494765 uncharacterized LOC7477014 probable DNA double-strand break repair Rad50 ATPase uncharacterized LOC101265866 uncharacterized LOC101267009 golgin subfamily A member 1-like golgin subfamily A member 6-like protein 2 uncharacterized LOC107805530 uncharacterized LOC107807644 uncharacterized LOC107783712
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna00564 Glycerophospholipid metabolism 3
bna00565 Ether lipid metabolism 3
bna00590 Arachidonic acid metabolism 3
bna00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta00564 Glycerophospholipid metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 5
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826986 821976 103863625 103828654 106385529 106426994 106454473 107890596 107935213 102625890 100815580 100804745 100306230 7494765 7477014 25483033 101265866 101267009 102594551 102586432 107805530 107807644 107783712
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