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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SBP2   selenium-binding protein 2 
 ath-r.7   SBP2   selenium-binding protein 2 
 ath-e.2   SBP2   selenium-binding protein 2 
 ath-u.5   SBP3   selenium-binding protein 3 
 ath-u.5   SBP1   selenium-binding protein 1 
 bra-r.6   103828707   selenium-binding protein 3 
 bra-r.6   103863568   selenium-binding protein 2 
 bra-r.6   103833776   selenium-binding protein 1 
 bna-r.1   106445784   selenium-binding protein 2-like 
 bna-r.1   111202961   selenium-binding protein 3 
 bna-r.1   106401617   selenium-binding protein 2 
 ghi-r.1   107934466   selenium-binding protein 2 
 ghi-r.1   107934467   selenium-binding protein 1 
 ghi-r.1   107934468   selenium-binding protein 1 
 cit-r.1   102613825   selenium-binding protein 2 
 gma-u.5   606297   selenium-binding protein 1 
 gma-u.5   100813286   selenium-binding protein 2 
 gma-u.5   100794235   selenium-binding protein 1 
 vvi-u.5   100265737   selenium-binding protein 1 
 ppo-u.5   7495831   selenium-binding protein 1 
 ppo-u.5   18107105   selenium-binding protein 1 
 mtr-u.5   11436310   selenium-binding protein 1 
 sly-u.5   101249583   selenium-binding protein 2 
 sot-r.1   102600424   selenium-binding protein 2-like 
 nta-r.1   107791028   selenium-binding protein 1-like 
 nta-r.1   107765905   selenium-binding protein 1 
 osa-u.5   4324333   selenium-binding protein 1 
 zma-u.5   100192654   uncharacterized LOC100192654 
 tae-r.2   123063062   selenium-binding protein 1 
 tae-r.2   123071957   selenium-binding protein 1 
 tae-r.2   123080262   selenium-binding protein 1 
 hvu-r.1   123445202   selenium-binding protein 1-like 
 sbi-r.1   8059355   selenium-binding protein 1 
 bdi-r.1   100840507   selenium-binding protein 1 
 cre-r.1   CHLRE_03g166050v5   uncharacterized protein 

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Top 50 coexpressed genes to SBP2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SBP2 (ath-u.5 coexpression data)

CoexMap"827040"


athSBP2 | Entrez gene ID : 827040      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 1 3 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00920 [list] [network] Sulfur metabolism (40 genes)
GO BP
GO:0010197 [list] [network] polar nucleus fusion  (31 genes)  IMP  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (143 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008430 [list] [network] selenium binding  (3 genes)  IEA  
Protein NP_193140.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  chlo_mito 3  (predict for NP_193140.1)
Subcellular
localization
TargetP
other 7  (predict for NP_193140.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SBP2
ath-r.7
for
SBP2
ath-e.2
for
SBP2
ath-u.5
for
SBP3
ath-u.5
for
SBP1
bra-r.6
for
103828707
bra-r.6
for
103863568
bra-r.6
for
103833776
bna-r.1
for
106445784
bna-r.1
for
111202961
bna-r.1
for
106401617
ghi-r.1
for
107934466
ghi-r.1
for
107934467
ghi-r.1
for
107934468
cit-r.1
for
102613825
gma-u.5
for
606297
gma-u.5
for
100813286
gma-u.5
for
100794235
vvi-u.5
for
100265737
ppo-u.5
for
7495831
ppo-u.5
for
18107105
mtr-u.5
for
11436310
sly-u.5
for
101249583
sot-r.1
for
102600424
nta-r.1
for
107791028
nta-r.1
for
107765905
osa-u.5
for
4324333
zma-u.5
for
100192654
tae-r.2
for
123063062
tae-r.2
for
123071957
tae-r.2
for
123080262
hvu-r.1
for
123445202
sbi-r.1
for
8059355
bdi-r.1
for
100840507
cre-r.1
for
CHLRE_03g166050v5


Ortholog ID: 3934
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol SBP2 SBP3 SBP1 LOC103863568 LOC103833776 LOC103863571 LOC106394635 LOC106415119 LOC106449425 LOC107934466 LOC107934467 LOC107934468 LOC102613825 LOC606297 LOC100794235 LOC100788278 LOC100265737 LOC7495831 LOC18107105 LOC11436310 LOC101249583 LOC102600424 LOC107791028 LOC107765905 LOC4324333 LOC100192654 LOC123063062 LOC123071957 LOC123080262 LOC123445202 LOC8059355 LOC100840507 CHLRE_03g166050v5
Function* selenium-binding protein 2 selenium-binding protein 3 selenium-binding protein 1 selenium-binding protein 2 selenium-binding protein 1 selenium-binding protein 1-like selenium-binding protein 1-like selenium-binding protein 2-like selenium-binding protein 1-like selenium-binding protein 2 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 2 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 2 selenium-binding protein 2-like selenium-binding protein 1-like selenium-binding protein 1 selenium-binding protein 1 uncharacterized LOC100192654 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1 selenium-binding protein 1-like selenium-binding protein 1 selenium-binding protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 9
ath00966 Glucosinolate biosynthesis 8
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00270 Cysteine and methionine metabolism 3
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 5
ath01320 Sulfur cycle 3
ath00270 Cysteine and methionine metabolism 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 4
bra01200 Carbon metabolism 4
bra00071 Fatty acid degradation 2
bra00592 alpha-Linolenic acid metabolism 2
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 2
bra04144 Endocytosis 2
bra04145 Phagosome 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 2
cit04517 IgSF CAM signaling 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 5
gma00270 Cysteine and methionine metabolism 4
gma01320 Sulfur cycle 3
gma00670 One carbon pool by folate 3
gma04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma00052 Galactose metabolism 2
gma00500 Starch and sucrose metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00920 Sulfur metabolism 4
ppo01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 3
sly00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 7
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 5
nta00920 Sulfur metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04712 Circadian rhythm - plant 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00920 Sulfur metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 5
osa00260 Glycine, serine and threonine metabolism 3
osa00310 Lysine degradation 3
osa01230 Biosynthesis of amino acids 2
osa00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 5
zma00920 Sulfur metabolism 4
zma01230 Biosynthesis of amino acids 2
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 8
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 8
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 8
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 3
hvu00640 Propanoate metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00450 Selenocompound metabolism 2
sbi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 4
bdi00450 Selenocompound metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00920 Sulfur metabolism 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00270 Cysteine and methionine metabolism 3
cre00920 Sulfur metabolism 3
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
cre01320 Sulfur cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827040 821962 827039 103863568 103833776 103863571 106394635 106415119 106449425 107934466 107934467 107934468 102613825 606297 100794235 100788278 100265737 7495831 18107105 11436310 101249583 102600424 107791028 107765905 4324333 100192654 123063062 123071957 123080262 123445202 8059355 100840507 5729027
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