ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	CKL6	casein kinase I-like 6
ath-r.7	CKL6	casein kinase I-like 6
ath-m.9	CKL6	casein kinase I-like 6
ath-e.2	CKL6	casein kinase I-like 6
ath-m.4.bio	CKL6	casein kinase I-like 6
ath-m.4.hor	CKL6	casein kinase I-like 6
ath-m.4.lig	CKL6	casein kinase I-like 6
ath-m.4.str	CKL6	casein kinase I-like 6
ath-m.4.tis	CKL6	casein kinase I-like 6
ath-u.5	ckl5	casein kinase I-like 5
ath-u.5	CKL2	casein kinase 1-like protein 2
ath-u.5	CKL13	casein kinase like 13
bra-r.6	103870642	casein kinase 1-like protein 11
bra-r.6	103844254	casein kinase 1-like protein 13
bra-r.6	103833714	casein kinase 1-like protein 10
bna-r.1	106375561	casein kinase 1-like protein 3
bna-r.1	125577886	casein kinase 1-like protein 8
bna-r.1	125575072	casein kinase 1-like protein 7
ghi-r.1	107901263	casein kinase 1-like protein 3
ghi-r.1	107930854	casein kinase 1-like protein 3
ghi-r.1	107932064	casein kinase 1-like protein 1
cit-r.1	102613955	casein kinase 1-like protein 3
cit-r.1	102618517	casein kinase 1-like protein 1
cit-r.1	102622007	casein kinase 1-like protein 2
gma-u.5	100784627	casein kinase 1-like protein 1
gma-u.5	100783824	casein kinase 1-like protein 6
gma-u.5	100782913	casein kinase 1-like protein 3
vvi-u.5	100244694	casein kinase 1-like protein 2
vvi-u.5	100265228	casein kinase 1-like protein 10
vvi-u.5	100242639	casein kinase 1-like protein 10
ppo-u.5	18107696	casein kinase 1-like protein 2
ppo-u.5	7467543	casein kinase 1-like protein 10
ppo-u.5	7471533	casein kinase 1-like protein 3
mtr-u.5	25490124	casein kinase I
mtr-u.5	11420813	casein kinase 1-like protein 10
mtr-u.5	11429296	casein kinase 1-like protein 10
sly-u.5	101258260	casein kinase 1-like protein 2
sly-u.5	101265454	casein kinase 1-like protein 2
sly-u.5	101263221	casein kinase 1-like protein 2
sot-r.1	102578304	casein kinase I-like
sot-r.1	102584753	casein kinase I-like
sot-r.1	102584967	casein kinase I
nta-r.1	107786701	casein kinase 1-like protein 3
nta-r.1	107772563	casein kinase 1-like protein 10
nta-r.1	107807697	uncharacterized LOC107807697
osa-u.5	4325891	casein kinase 1-like protein 3
osa-u.5	4326345	uncharacterized LOC4326345
osa-u.5	9267711	casein kinase 1-like protein 2
zma-u.5	100285265	casein kinase I
zma-u.5	100281714	uncharacterized LOC100281714
zma-u.5	100279946	putative casein kinase family protein
tae-r.2	123070386	casein kinase 1-like protein 2
tae-r.2	123105332	casein kinase 1-like protein 10
hvu-r.1	123452723	casein kinase 1-like protein 2
hvu-r.1	123452604	casein kinase 1-like
hvu-r.1	123444240	casein kinase 1-like protein 2
sbi-r.1	110433550	casein kinase 1-like protein 3
sbi-r.1	110436292	casein kinase 1-like
sbi-r.1	8084684	casein kinase I
bdi-r.1	100841036	casein kinase 1-like protein 10
bdi-r.1	100840824	casein kinase 1-like protein 2
cre-r.1	CHLRE_12g549750v5	uncharacterized protein

Top 50 coexpressed genes to CKL6 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CKL6 (ath-u.5 coexpression data)

CoexMap"828972"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0043622 [list] [network] cortical microtubule organization	(50 genes)	IMP
GO:0051510 [list] [network] regulation of unidimensional cell growth	(82 genes)	IMP
GO:0001558 [list] [network] regulation of cell growth	(119 genes)	IMP
GO:0046777 [list] [network] protein autophosphorylation	(119 genes)	HDA

GO CC

GO:0055028 [list] [network] cortical microtubule	(50 genes)	IDA IMP
GO:0005856 [list] [network] cytoskeleton	(246 genes)	IDA
GO:0009506 [list] [network] plasmodesma	(874 genes)	TAS
GO:0030054 [list] [network] cell junction	(874 genes)	IDA
GO:0012505 [list] [network] endomembrane system	(2163 genes)	IDA
GO:0071944 [list] [network] cell periphery	(3051 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0015631 [list] [network] tubulin binding	(111 genes)	IDA
GO:0004674 [list] [network] protein serine/threonine kinase activity	(433 genes)	HDA IDA

Protein

NP_567812.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 2

(predict for NP_567812.1)

Subcellular
localization
TargetP

other 8

(predict for NP_567812.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for CKL6	ath-r.7 for CKL6	ath-m.9 for CKL6	ath-e.2 for CKL6	ath-m.4.bio for CKL6	ath-m.4.hor for CKL6	ath-m.4.lig for CKL6	ath-m.4.str for CKL6	ath-m.4.tis for CKL6	ath-u.5 for ckl5	ath-u.5 for CKL2	ath-u.5 for CKL13	bra-r.6 for 103870642	bra-r.6 for 103844254	bra-r.6 for 103833714	bna-r.1 for 106375561	bna-r.1 for 125577886	bna-r.1 for 125575072	ghi-r.1 for 107901263	ghi-r.1 for 107930854	ghi-r.1 for 107932064	cit-r.1 for 102613955	cit-r.1 for 102618517	cit-r.1 for 102622007	gma-u.5 for 100784627	gma-u.5 for 100783824	gma-u.5 for 100782913	vvi-u.5 for 100244694	vvi-u.5 for 100265228	vvi-u.5 for 100242639	ppo-u.5 for 18107696	ppo-u.5 for 7467543	ppo-u.5 for 7471533	mtr-u.5 for 25490124	mtr-u.5 for 11420813	mtr-u.5 for 11429296	sly-u.5 for 101258260	sly-u.5 for 101265454	sly-u.5 for 101263221	sot-r.1 for 102578304	sot-r.1 for 102584753	sot-r.1 for 102584967	nta-r.1 for 107786701	nta-r.1 for 107772563	nta-r.1 for 107807697	osa-u.5 for 4325891	osa-u.5 for 4326345	osa-u.5 for 9267711	zma-u.5 for 100285265	zma-u.5 for 100281714	zma-u.5 for 100279946	tae-r.2 for 123070386	tae-r.2 for 123105332	hvu-r.1 for 123452723	hvu-r.1 for 123452604	hvu-r.1 for 123444240	sbi-r.1 for 110433550	sbi-r.1 for 110436292	sbi-r.1 for 8084684	bdi-r.1 for 100841036	bdi-r.1 for 100840824	cre-r.1 for CHLRE_12g549750v5

Ortholog

Ortholog ID: 103

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CKL6

ckl8

CK1

Function^*

casein kinase I-like 6

casein kinase I-like 8

casein kinase 1

casein kinase 1-like protein 5

casein kinase 1-like protein 8

casein kinase 1-like protein 12

casein kinase 1-like protein 10

casein kinase 1-like protein 12

casein kinase 1-like protein 6

casein kinase 1-like protein 10

casein kinase 1-like protein 7

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 3

casein kinase 1-like protein 10

casein kinase 1-like protein 6

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1-like protein 3

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase I

casein kinase 1-like protein 2

casein kinase 1-like protein 11

protein kinase superfamily protein

casein kinase I

casein kinase 1-like protein 11

uncharacterized LOC107769362

casein kinase 1-like protein 3

casein kinase 1-like

casein kinase I

casein kinase 1-like protein 2

putative casein kinase family protein

casein kinase 1-like protein 1

casein kinase I

casein kinase 1-like protein 3

casein kinase 1-like protein 2

casein kinase I-like

casein kinase 1-like protein 3

casein kinase 1-like protein 2

casein kinase 1-like protein 3

casein kinase 1-like protein 10

casein kinase 1-like protein 3

casein kinase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	3
bra03420	Nucleotide excision repair	3
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi00190	Oxidative phosphorylation	2
ghi00860	Porphyrin metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2
ghi04144	Endocytosis	2
ghi04814	Motor proteins	2
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00030	Pentose phosphate pathway	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	5
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03060	Protein export	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu04626	Plant-pathogen interaction	3
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03015	mRNA surveillance pathway	3
cre04382	Cornified envelope formation	2

Expression

Expression pattern

Entrez Gene ID^*

828972

834350

828716

103837959

103839247

103851790

106406932

106416395

106389778

107936256

107926818

107897892

102622007

102626357

102631472

100805890

100804897

100789031

100265228

100261234

100247344

18107696

7467543

7485740

11420813

11430421

25481844

101258260

101262628

101254665

102592835

102596684

102598967

107818766

107769362

107813141

4325891

4330018

4336396

100285265

100273747

100383522

123069955

123078410

123137039

123444240

123443735

123401749

110433550

8066565

8080405

100841036

100838167

100835656

5719647

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	3	3	3	3	3	3	3	3	3	3	3	3	2	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CKL6 (ath-u.5 coexpression data)

Top 50 enrichment test to CKL6 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**