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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G05090   Homeodomain-like superfamily protein 
 ath-m.4.bio   AT5G05090   Homeodomain-like superfamily protein 
 ath-m.4.hor   AT5G05090   Homeodomain-like superfamily protein 
 ath-m.4.lig   AT5G05090   Homeodomain-like superfamily protein 
 ath-m.4.str   AT5G05090   Homeodomain-like superfamily protein 
 ath-m.4.tis   AT5G05090   Homeodomain-like superfamily protein 
 ath-u.5   MYBC1   Homeodomain-like superfamily protein 
 ath-u.5   AT3G10760   Homeodomain-like superfamily protein 
 ath-u.5   PCL1   Homeodomain-like superfamily protein 
 gma-u.5   100797237   transcription factor MYBC1 
 gma-u.5   LUXC   transcription factor LUXc 
 gma-u.5   100815363   transcription factor MYBC1 
 vvi-u.5   100253567   transcription factor PCL1 
 vvi-u.5   100256764   transcription factor MYBC1 
 ppo-u.5   7495685   transcription factor MYBC1 
 ppo-u.5   7468625   transcription factor BOA 
 ppo-u.5   18106100   transcription factor MYBC1 
 mtr-u.5   11415024   transcription factor MYBC1 
 mtr-u.5   11427644   transcription factor PCL1 
 sly-u.5   101265183   transcription factor MYBC1 
 sly-u.5   PCL1   transcription factor PCL1 
 osa-u.5   4338783   transcription factor MYBC1 
 osa-u.5   4327512   transcription factor PCL1-like 
 osa-u.5   4326391   transcription factor PCL1-like 
 zma-u.5   107305672   Homeodomain-like superfamily protein 
 zma-u.5   100280967   ARR1 protein-like 
 zma-u.5   109945291   transcription factor PCL1 

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Top 50 coexpressed genes to AT5G05090 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G05090 (ath-m.9 coexpression data)

CoexMap"830391"


athAT5G05090 | Entrez gene ID : 830391      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 3 2 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_196128.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  extr 1,  cysk 1  (predict for NP_196128.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196128.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G05090
ath-m.4.bio
for
AT5G05090
ath-m.4.hor
for
AT5G05090
ath-m.4.lig
for
AT5G05090
ath-m.4.str
for
AT5G05090
ath-m.4.tis
for
AT5G05090
ath-u.5
for
MYBC1
ath-u.5
for
AT3G10760
ath-u.5
for
PCL1
gma-u.5
for
100797237
gma-u.5
for
LUXC
gma-u.5
for
100815363
vvi-u.5
for
100253567
vvi-u.5
for
100256764
ppo-u.5
for
7495685
ppo-u.5
for
7468625
ppo-u.5
for
18106100
mtr-u.5
for
11415024
mtr-u.5
for
11427644
sly-u.5
for
101265183
sly-u.5
for
PCL1
osa-u.5
for
4338783
osa-u.5
for
4327512
osa-u.5
for
4326391
zma-u.5
for
107305672
zma-u.5
for
100280967
zma-u.5
for
109945291


Ortholog ID: 1039
Species ath ath bra bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol MYBC1 PCL1 LOC103873296 LOC103866525 LOC106434567 LOC106376459 LOC107906573 LOC107922230 LOC102629958 LOC102629795 LOC100815363 LOC100797237 LOC100253567 LOC100256764 LOC7495685 LOC7468625 LOC11427644 LOC11415024 LOC101265183 LOC102600588 LOC102580374 LOC107763213 LOC107774049 LOC4327512 LOC4338783 LOC100280967 LOC107305672 LOC123055624 LOC123080986 LOC123441160 LOC123442999 LOC110433282 LOC8085135 LOC100835635 LOC100834697 CHLRE_09g410450v5
Function* Homeodomain-like superfamily protein Homeodomain-like superfamily protein transcription factor LUX-like transcription factor MYBC1 transcription factor MYBC1 transcription factor LUX-like transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1-like transcription factor LUX transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1 transcription factor BOA transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1-like transcription factor PCL1-like transcription factor PCL1-like transcription factor PCL1 transcription factor PCL1-like transcription factor MYBC1 ARR1 protein-like Homeodomain-like superfamily protein transcription factor MYBC1 transcription factor PCL1 transcription factor PCL1-like transcription factor MYBC1-like transcription factor PCL1-like transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818697 823817 103873296 103866525 106434567 106376459 107906573 107922230 102629958 102629795 100815363 100797237 100253567 100256764 7495685 7468625 11427644 11415024 101265183 102600588 102580374 107763213 107774049 4327512 4338783 100280967 107305672 123055624 123080986 123441160 123442999 110433282 8085135 100835635 100834697 5722278
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