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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-r.7   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.9   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-e.2   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.str   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT5G43920   transducin family protein / WD-40 repeat family protein 
 gma-u.5   100802844   WD repeat-containing protein 26 homolog 
 gma-u.5   100813925   WD repeat-containing protein 26 homolog 
 gma-u.5   100818922   WD repeat-containing protein WDS homolog 
 vvi-u.5   100266218   WD repeat-containing protein 26 homolog 
 vvi-u.5   100264261   WD repeat-containing protein 26 homolog 
 vvi-u.5   100251541   WD repeat-containing protein WDS homolog 
 ppo-u.5   7454305   WD repeat-containing protein 26 homolog 
 ppo-u.5   7464414   WD repeat-containing protein WDS homolog 
 ppo-u.5   7464664   WD repeat-containing protein 26 homolog 
 mtr-u.5   11426741   WD repeat-containing protein 26 homolog 
 mtr-u.5   25484185   WD repeat-containing protein WDS homolog 
 mtr-u.5   25490562   WD repeat-containing protein 26 homolog 
 sly-u.5   101248217   WD repeat-containing protein 26 homolog 
 sly-u.5   101258261   WD repeat-containing protein 26 homolog 
 sly-u.5   101267507   WD repeat-containing protein 26 homolog 
 osa-u.5   4348836   WD repeat-containing protein WDS homolog 
 osa-u.5   9266581   WD repeat-containing protein 26 homolog 
 zma-u.5   103643484   WD repeat-containing protein WDS homolog 
 zma-u.5   100304385   leunig-related8 
 zma-u.5   100194293   leunig-related7 

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Top 50 coexpressed genes to AT5G08560 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G08560 (ath-u.5 coexpression data)

CoexMap"830756"


athAT5G08560 | Entrez gene ID : 830756      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 10 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009646 [list] [network] response to absence of light  (58 genes)  IDA  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IDA  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078546.1 [sequence] [blastp]
NP_001318513.1 [sequence] [blastp]
NP_196473.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001078546.1)
nucl 9,  cyto 1  (predict for NP_001318513.1)
nucl 9,  cyto 1  (predict for NP_196473.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001078546.1)
other 5,  chlo 4  (predict for NP_001318513.1)
other 5,  chlo 4  (predict for NP_196473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G08560

.
ath-r.7
for
AT5G08560

.
ath-m.9
for
AT5G08560

.
ath-e.2
for
AT5G08560

.
ath-m.4.bio
for
AT5G08560

.
ath-m.4.hor
for
AT5G08560

.
ath-m.4.lig
for
AT5G08560

.
ath-m.4.str
for
AT5G08560

.
ath-m.4.tis
for
AT5G08560

.
ath-u.5
for
AT5G43920

.
gma-u.5
for
100802844

.
gma-u.5
for
100813925

.
gma-u.5
for
100818922

.
vvi-u.5
for
100266218

.
vvi-u.5
for
100264261

.
vvi-u.5
for
100251541

.
ppo-u.5
for
7454305

.
ppo-u.5
for
7464414

.
ppo-u.5
for
7464664

.
mtr-u.5
for
11426741

.
mtr-u.5
for
25484185

.
mtr-u.5
for
25490562

.
sly-u.5
for
101248217

.
sly-u.5
for
101258261

.
sly-u.5
for
101267507

.
osa-u.5
for
4348836

.
osa-u.5
for
9266581

.
zma-u.5
for
103643484

.
zma-u.5
for
100304385

.
zma-u.5
for
100194293

.


Ortholog ID: 1400
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G08560 AT5G43920 LOC100802844 LOC100813925 LOC101258261 LOC101267507 LOC9266581 LOC4348836 LOC100304385 LOC103643484 LOC103847170 LOC103855800 LOC100264261 LOC100251541 LOC7454305 LOC25490562 LOC25490564 LOC123119648 LOC123120188 LOC123407382 LOC123430424 LOC107942160 LOC107888468 LOC106383676 CHLRE_08g382515v5 LOC110436952 LOC8059263 LOC102590228 LOC102604387 LOC102631471 LOC102613121 LOC100828210 LOC100830778 LOC107827204 LOC107806490
Function* transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat family protein WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog leunig-related8 WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog uncharacterized protein WD repeat-containing protein 26 WD repeat-containing protein 26 WD repeat-containing protein 26 WD repeat-containing protein 26-like WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma00071 Fatty acid degradation 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00561 Glycerolipid metabolism 2
hvu00564 Glycerophospholipid metabolism 2
hvu00565 Ether lipid metabolism 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04070 Phosphatidylinositol signaling system 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 5
nta03420 Nucleotide excision repair 5
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830756 834414 100802844 100813925 101258261 101267507 9266581 4348836 100304385 103643484 103847170 103855800 100264261 100251541 7454305 25490562 25490564 123119648 123120188 123407382 123430424 107942160 107888468 106383676 5719838 110436952 8059263 102590228 102604387 102631471 102613121 100828210 100830778 107827204 107806490
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