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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-r.7   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.9   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-e.2   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.4.bio   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.4.hor   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.4.lig   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.4.str   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 
 ath-m.4.tis   AT5G12850   CCCH-type zinc finger protein with ARM repeat domain-containing protein 

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Top 50 coexpressed genes to AT5G12850 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G12850 (ath-u.5 coexpression data)

CoexMap"831125"


athAT5G12850 | Entrez gene ID : 831125      
Species ath tae mtr osa zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_196789.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_196789.1)
Subcellular
localization
TargetP
other 9  (predict for NP_196789.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G12850

.
ath-r.7
for
AT5G12850

.
ath-m.9
for
AT5G12850

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ath-e.2
for
AT5G12850

.
ath-m.4.bio
for
AT5G12850

.
ath-m.4.hor
for
AT5G12850

.
ath-m.4.lig
for
AT5G12850

.
ath-m.4.str
for
AT5G12850

.
ath-m.4.tis
for
AT5G12850

.


Ortholog ID: 22882
Species ath bra bna bna
Symbol AT5G12850 LOC103846626 LOC106372373 LOC106372338
Function* CCCH-type zinc finger protein with ARM repeat domain-containing protein zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 7
bra00541 Biosynthesis of various nucleotide sugars 5
bra00520 Amino sugar and nucleotide sugar metabolism 4
bra00053 Ascorbate and aldarate metabolism 2
bra01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831125 103846626 106372373 106372338
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