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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G13200   GRAM domain family protein 
 ath-r.7   AT5G13200   GRAM domain family protein 
 ath-m.9   AT5G13200   GRAM domain family protein 
 ath-e.2   AT5G13200   GRAM domain family protein 
 ath-m.4.bio   AT5G13200   GRAM domain family protein 
 ath-m.4.hor   AT5G13200   GRAM domain family protein 
 ath-m.4.lig   AT5G13200   GRAM domain family protein 
 ath-m.4.str   AT5G13200   GRAM domain family protein 
 ath-m.4.tis   AT5G13200   GRAM domain family protein 
 bra-r.6   103850853   GEM-like protein 5 
 bna-r.1   106406931   GEM-like protein 5 
 bna-r.1   106384051   GEM-like protein 5 
 ghi-r.1   121203268   GEM-like protein 5 
 ghi-r.1   107909527   GEM-like protein 5 
 ghi-r.1   107893236   GEM-like protein 5 
 cit-r.1   102606662   GEM-like protein 5 
 cit-r.1   102615765   GEM-like protein 5 
 gma-u.5   100811963   GEm-Related 5-like protein 
 gma-u.5   100794005   GEM-like protein 5 
 vvi-u.5   100265266   GEM-like protein 5 
 vvi-u.5   100250606   GEM-like protein 5 
 vvi-u.5   100248212   GEM-like protein 5 
 ppo-u.5   7496546   GEM-like protein 5 
 mtr-u.5   11442633   GEM-like protein 5 
 sly-u.5   101266747   GEM-like protein 5 
 sly-u.5   101259275   GEM-like protein 5 
 sot-r.1   102591258   GEM-like protein 5 
 sot-r.1   102605589   GEM-like protein 5 
 nta-r.1   107823763   GEM-like protein 5 
 nta-r.1   107766879   GEM-like protein 5 
 osa-u.5   9267937   GEM-like protein 5 
 zma-u.5   100285725   ABA-responsive protein 
 tae-r.2   123123564   GEM-like protein 5 
 tae-r.2   123114069   GEM-like protein 5 
 tae-r.2   123105739   GEM-like protein 5 
 hvu-r.1   123439888   predicted GPI-anchored protein 58 
 hvu-r.1   123453125   GEM-like protein 5 
 sbi-r.1   8063246   GEM-like protein 5 
 bdi-r.1   100836482   GEM-like protein 5 

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Top 50 coexpressed genes to AT5G13200 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G13200 (ath-u.5 coexpression data)

CoexMap"831159"


athAT5G13200 | Entrez gene ID : 831159      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 2 2 3 1 1 2 2 2 1 1 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0098755 [list] [network] maintenance of seed dormancy by absisic acid  (1 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (105 genes)  IMP  
GO:0009845 [list] [network] seed germination  (111 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001330875.1 [sequence] [blastp]
NP_196824.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001330875.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_196824.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330875.1)
other 9  (predict for NP_196824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G13200
ath-r.7
for
AT5G13200
ath-m.9
for
AT5G13200
ath-e.2
for
AT5G13200
ath-m.4.bio
for
AT5G13200
ath-m.4.hor
for
AT5G13200
ath-m.4.lig
for
AT5G13200
ath-m.4.str
for
AT5G13200
ath-m.4.tis
for
AT5G13200
bra-r.6
for
103850853
bna-r.1
for
106406931
bna-r.1
for
106384051
ghi-r.1
for
121203268
ghi-r.1
for
107909527
ghi-r.1
for
107893236
cit-r.1
for
102606662
cit-r.1
for
102615765
gma-u.5
for
100811963
gma-u.5
for
100794005
vvi-u.5
for
100265266
vvi-u.5
for
100250606
vvi-u.5
for
100248212
ppo-u.5
for
7496546
mtr-u.5
for
11442633
sly-u.5
for
101266747
sly-u.5
for
101259275
sot-r.1
for
102591258
sot-r.1
for
102605589
nta-r.1
for
107823763
nta-r.1
for
107766879
osa-u.5
for
9267937
zma-u.5
for
100285725
tae-r.2
for
123123564
tae-r.2
for
123114069
tae-r.2
for
123105739
hvu-r.1
for
123439888
hvu-r.1
for
123453125
sbi-r.1
for
8063246
bdi-r.1
for
100836482


Ortholog ID: 5829
Species ath bra bna bna ghi ghi ghi cit cit gma gma vvi vvi vvi ppo ppo mtr sly sly sot sot nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol AT5G13200 LOC103850853 LOC106406931 LOC106384051 LOC121203268 LOC107909527 LOC107937115 LOC102606662 LOC102615765 LOC100811963 LOC100794005 LOC100265266 LOC100250606 LOC100248212 LOC7496546 LOC7481191 LOC11442633 LOC101266747 LOC101259275 LOC102591258 LOC102605589 LOC107823763 LOC107766879 LOC9267937 LOC100285725 LOC123123564 LOC123114069 LOC123105739 LOC123439888 LOC123453125 LOC8063246 LOC100836482
Function* GRAM domain family protein GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEm-Related 5-like protein GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 ABA-responsive protein GEM-like protein 5 GEM-like protein 5 GEM-like protein 5 predicted GPI-anchored protein 58 GEM-like protein 5 GEM-like protein 5 GEM-like protein 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 3
ghi04712 Circadian rhythm - plant 3
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00460 Cyanoamino acid metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi03040 Spliceosome 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta03272 Virion - Hepatitis viruses 3
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00965 Betalain biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831159 103850853 106406931 106384051 121203268 107909527 107937115 102606662 102615765 100811963 100794005 100265266 100250606 100248212 7496546 7481191 11442633 101266747 101259275 102591258 102605589 107823763 107766879 9267937 100285725 123123564 123114069 123105739 123439888 123453125 8063246 100836482
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