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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-r.7   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.9   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-e.2   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.4.bio   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.4.hor   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.4.lig   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.4.str   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 ath-m.4.tis   AGL26   tRNA (cytidine(34)-2'-O)-methyltransferase 
 bra-r.6   117132420   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 bra-r.6   103859540   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 bna-r.1   125584496   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 bna-r.1   106390452   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 ghi-r.1   107930111   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 ghi-r.1   107900731   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 cit-r.1   102626218   hypothetical protein 
 gma-u.5   100813874   putative tRNA (cytidine(34)-2'-O)-methyltransferase-like 
 vvi-u.5   100855321   uncharacterized LOC100855321 
 ppo-u.5   7454896   uncharacterized LOC7454896 
 mtr-u.5   11421937   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 sly-u.5   101265962   uncharacterized LOC101265962 
 nta-r.1   107820968   uncharacterized LOC107820968 
 nta-r.1   107820483   uncharacterized LOC107820483 
 osa-u.5   4345983   uncharacterized LOC4345983 
 zma-u.5   103641996   uncharacterized LOC103641996 
 tae-r.2   123160750   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 tae-r.2   123151176   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 tae-r.2   123166768   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 hvu-r.1   123411725   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 sbi-r.1   8055182   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 bdi-r.1   100846630   putative tRNA (cytidine(34)-2'-O)-methyltransferase 
 cre-r.1   CHLRE_10g417650v5   uncharacterized protein 

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Top 50 coexpressed genes to AGL26 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL26 (ath-u.5 coexpression data)

CoexMap"832746"


athAGL26 | Entrez gene ID : 832746      
Species ath bra bna ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 9 2 2 2 1 1 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006995 [list] [network] cellular response to nitrogen starvation  (28 genes)  IEP  
GO:0001510 [list] [network] RNA methylation  (40 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (588 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (43 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001318659.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4,  cyto_mito 2  (predict for NP_001318659.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for NP_001318659.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AGL26
ath-r.7
for
AGL26
ath-m.9
for
AGL26
ath-e.2
for
AGL26
ath-m.4.bio
for
AGL26
ath-m.4.hor
for
AGL26
ath-m.4.lig
for
AGL26
ath-m.4.str
for
AGL26
ath-m.4.tis
for
AGL26
bra-r.6
for
117132420
bra-r.6
for
103859540
bna-r.1
for
125584496
bna-r.1
for
106390452
ghi-r.1
for
107930111
ghi-r.1
for
107900731
cit-r.1
for
102626218
gma-u.5
for
100813874
vvi-u.5
for
100855321
ppo-u.5
for
7454896
mtr-u.5
for
11421937
sly-u.5
for
101265962
nta-r.1
for
107820968
nta-r.1
for
107820483
osa-u.5
for
4345983
zma-u.5
for
103641996
tae-r.2
for
123160750
tae-r.2
for
123151176
tae-r.2
for
123166768
hvu-r.1
for
123411725
sbi-r.1
for
8055182
bdi-r.1
for
100846630
cre-r.1
for
CHLRE_10g417650v5


Ortholog ID: 9695
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AGL26 LOC117132420 LOC103859540 LOC125584496 LOC106390452 LOC106389160 LOC107930111 LOC107900731 LOC102626218 LOC100813874 LOC100855321 LOC7454896 LOC11421937 LOC101265962 LOC107820968 LOC107820483 LOC4345983 LOC103641996 LOC123160750 LOC123151176 LOC123166768 LOC123411725 LOC8055182 LOC100846630 CHLRE_10g417650v5
Function* tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase hypothetical protein putative tRNA (cytidine(34)-2'-O)-methyltransferase-like uncharacterized LOC100855321 uncharacterized LOC7454896 putative tRNA (cytidine(34)-2'-O)-methyltransferase uncharacterized LOC101265962 uncharacterized LOC107820968 uncharacterized LOC107820483 uncharacterized LOC4345983 uncharacterized LOC103641996 putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase putative tRNA (cytidine(34)-2'-O)-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00300 Lysine biosynthesis 3
bra01230 Biosynthesis of amino acids 3
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04136 Autophagy - other 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03018 RNA degradation 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00770 Pantothenate and CoA biosynthesis 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832746 117132420 103859540 125584496 106390452 106389160 107930111 107900731 102626218 100813874 100855321 7454896 11421937 101265962 107820968 107820483 4345983 103641996 123160750 123151176 123166768 123411725 8055182 100846630 5728343
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