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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PDF1.2   plant defensin 1.2 
 ath-r.7   PDF1.2   plant defensin 1.2 
 ath-m.9   PDF1.2   plant defensin 1.2 
 ath-e.2   PDF1.2   plant defensin 1.2 
 ath-m.4.bio   PDF1.2   plant defensin 1.2 
 ath-m.4.hor   PDF1.2   plant defensin 1.2 
 ath-m.4.lig   PDF1.2   plant defensin 1.2 
 ath-m.4.str   PDF1.2   plant defensin 1.2 
 ath-m.4.tis   PDF1.2   plant defensin 1.2 
 ath-u.5   PDF1.3   plant defensin 1.3 
 ath-u.5   PDF1.2b   plant defensin 1.2b 
 ath-u.5   PDF1.2c   plant defensin 1.2C 
 gma-u.5   100779239   defensin-like protein 
 mtr-u.5   25500300   defensin-like protein 19 
 sly-u.5   101244389   defensin-like protein 1 

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Top 50 coexpressed genes to PDF1.2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PDF1.2 (ath-u.5 coexpression data)

CoexMap"834469"


athPDF1.2 | Entrez gene ID : 834469    
Species ath gma mtr sly tae osa hvu zma ghi bdi cit vvi bra cre sbi ppo bna nta sot
Paralog 12 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04016 [list] [network] MAPK signaling pathway - plant (146 genes)
GO BP
GO:0009861 [list] [network] jasmonic acid and ethylene-dependent systemic resistance  (18 genes)  TAS  
GO:0009625 [list] [network] response to insect  (66 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IEP  
GO:0009751 [list] [network] response to salicylic acid  (179 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0006952 [list] [network] defense response  (1016 genes)  TAS  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_199255.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 9  (predict for NP_199255.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_199255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PDF1.2

.
ath-r.7
for
PDF1.2

.
ath-m.9
for
PDF1.2

.
ath-e.2
for
PDF1.2

.
ath-m.4.bio
for
PDF1.2

.
ath-m.4.hor
for
PDF1.2

.
ath-m.4.lig
for
PDF1.2

.
ath-m.4.str
for
PDF1.2

.
ath-m.4.tis
for
PDF1.2

.
ath-u.5
for
PDF1.3

.
ath-u.5
for
PDF1.2b

.
ath-u.5
for
PDF1.2c

.
gma-u.5
for
100779239

.
mtr-u.5
for
25500300

.
sly-u.5
for
101244389

.


Ortholog ID: 3774
Species ath ath gma sly bra bra mtr bna bna sot sot cit cit nta nta
Symbol LCR67 PDF1.4 LOC100779239 LOC101244389 LOC103830637 LOC103852987 LOC25500300 LOC106421519 LOC106421520 LOC107063473 LOC107063479 LOC127899058 LOC102619584 LOC107798795 LOC107798797
Function* low-molecular-weight cysteine-rich 67 defensin-like protein defensin-like protein defensin-like protein 1 defensin-like protein 1 defensin-like protein 1 defensin-like protein 19 defensin-like protein 4 defensin-like protein 4 defensin D1-like defensin D1-like defensin-like protein 1 defensin-like protein 19 defensin-like protein 1 defensin-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04016 MAPK signaling pathway - plant 2
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 9
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 8
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843916 838548 100779239 101244389 103830637 103852987 25500300 106421519 106421520 107063473 107063479 127899058 102619584 107798795 107798797
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