ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	PDF1.2c	plant defensin 1.2C
ath-r.7	PDF1.2c	plant defensin 1.2C
ath-e.2	PDF1.2c	plant defensin 1.2C
ath-u.5	PDF1.3	plant defensin 1.3
ath-u.5	PDF1.2b	plant defensin 1.2b
ath-u.5	PDF1.2	plant defensin 1.2
gma-u.5	100779239	defensin-like protein
mtr-u.5	25500300	defensin-like protein 19
sly-u.5	101244389	defensin-like protein 1

functional annotation

KEGG

ath04016 [list] [network] MAPK signaling pathway - plant (146 genes)

GO BP

GO:0006952 [list] [network] defense response

(1016 genes)

ISS

GO CC

GO:0005576 [list] [network] extracellular region

(3158 genes)

ISM

GO MF

Protein

NP_199256.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 10

(predict for NP_199256.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_199256.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for PDF1.2c .	ath-r.7 for PDF1.2c .	ath-e.2 for PDF1.2c .	ath-u.5 for PDF1.3 .	ath-u.5 for PDF1.2b .	ath-u.5 for PDF1.2 .	gma-u.5 for 100779239 .	mtr-u.5 for 25500300 .	sly-u.5 for 101244389 .

Ortholog ID: 3774

Species

ath

gma

sly

bra

mtr

bna

sot

cit

nta

Symbol

LCR67

PDF1.4

Function^*

low-molecular-weight cysteine-rich 67

defensin-like protein

defensin-like protein 1

defensin-like protein 19

defensin-like protein 4

defensin D1-like

defensin-like protein 1

defensin-like protein 19

defensin-like protein 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra01200	Carbon metabolism	3
bra04016	MAPK signaling pathway - plant	2
bra00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	9
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	8
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

843916

838548

100779239

101244389

103830637

103852987

25500300

106421519

106421520

107063473

107063479

127899058

102619584

107798795

107798797

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to PDF1.2c (ath-u.5 coexpression data)

Top 50 enrichment test to PDF1.2c (ath-u.5 coexpression data)


Species	ath	gma	mtr	sly	tae	osa	hvu	zma	ghi	bdi	cit	vvi	bra	cre	sbi	ppo	bna	nta	sot
Paralog	6	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to PDF1.2c (ath-u.5 coexpression data)

Top 50 enrichment test to PDF1.2c (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**