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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G51140   Pseudouridine synthase family protein 
 ath-r.7   AT5G51140   Pseudouridine synthase family protein 
 ath-m.9   AT5G51140   Pseudouridine synthase family protein 
 ath-e.2   AT5G51140   Pseudouridine synthase family protein 
 ath-m.4.bio   AT5G51140   Pseudouridine synthase family protein 
 ath-m.4.hor   AT5G51140   Pseudouridine synthase family protein 
 ath-m.4.lig   AT5G51140   Pseudouridine synthase family protein 
 ath-m.4.str   AT5G51140   Pseudouridine synthase family protein 
 ath-m.4.tis   AT5G51140   Pseudouridine synthase family protein 
 bra-r.6   103857197   RNA pseudouridine synthase 7 
 bra-r.6   103852163   RNA pseudouridine synthase 7 
 bna-r.1   125581912   RNA pseudouridine synthase 7-like 
 bna-r.1   106345873   RNA pseudouridine synthase 7-like 
 bna-r.1   106387919   RNA pseudouridine synthase 7 
 ghi-r.1   107949602   RNA pseudouridine synthase 7 
 ghi-r.1   121215504   RNA pseudouridine synthase 7 
 cit-r.1   102628313   RNA pseudouridine synthase 7 
 gma-u.5   100811500   RNA pseudouridine synthase 7 
 vvi-u.5   100255954   RNA pseudouridine synthase 7 
 ppo-u.5   7454741   RNA pseudouridine synthase 7 
 mtr-u.5   11424387   RNA pseudouridine synthase 7 
 sly-u.5   101254284   RNA pseudouridine synthase 7 
 sot-r.1   102599479   RNA pseudouridine synthase 7 
 nta-r.1   107789965   RNA pseudouridine synthase 7 
 nta-r.1   107791949   RNA pseudouridine synthase 7 
 osa-u.5   9269812   RNA pseudouridine synthase 7-like 
 zma-u.5   100217137   RNA pseudouridine synthase 7 
 tae-r.2   123105416   RNA pseudouridine synthase 7 
 tae-r.2   123113687   RNA pseudouridine synthase 7 
 tae-r.2   123123215   RNA pseudouridine synthase 7 
 hvu-r.1   123452724   RNA pseudouridine synthase 7 
 sbi-r.1   110435137   RNA pseudouridine synthase 7 
 bdi-r.1   100830962   RNA pseudouridine synthase 7 
 cre-r.1   CHLRE_17g702400v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G51140 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G51140 (ath-u.5 coexpression data)

CoexMap"835188"


athAT5G51140 | Entrez gene ID : 835188      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (18 genes)  TAS  
Protein NP_001190513.1 [sequence] [blastp]
NP_199927.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001190513.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_199927.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190513.1)
other 9  (predict for NP_199927.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G51140
ath-r.7
for
AT5G51140
ath-m.9
for
AT5G51140
ath-e.2
for
AT5G51140
ath-m.4.bio
for
AT5G51140
ath-m.4.hor
for
AT5G51140
ath-m.4.lig
for
AT5G51140
ath-m.4.str
for
AT5G51140
ath-m.4.tis
for
AT5G51140
bra-r.6
for
103857197
bra-r.6
for
103852163
bna-r.1
for
125581912
bna-r.1
for
106345873
bna-r.1
for
106387919
ghi-r.1
for
107949602
ghi-r.1
for
121215504
cit-r.1
for
102628313
gma-u.5
for
100811500
vvi-u.5
for
100255954
ppo-u.5
for
7454741
mtr-u.5
for
11424387
sly-u.5
for
101254284
sot-r.1
for
102599479
nta-r.1
for
107789965
nta-r.1
for
107791949
osa-u.5
for
9269812
zma-u.5
for
100217137
tae-r.2
for
123105416
tae-r.2
for
123113687
tae-r.2
for
123123215
hvu-r.1
for
123452724
sbi-r.1
for
110435137
bdi-r.1
for
100830962
cre-r.1
for
CHLRE_17g702400v5


Ortholog ID: 7758
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G51140 LOC103857197 LOC103852163 LOC125581912 LOC106345873 LOC106387919 LOC107949602 LOC121215504 LOC102628313 LOC100811500 LOC100255954 LOC7454741 LOC11424387 LOC101254284 LOC102599479 LOC107789965 LOC107791949 LOC9269812 LOC100217137 LOC123105416 LOC123113687 LOC123123215 LOC123452724 LOC110435137 LOC100830962 CHLRE_17g702400v5
Function* Pseudouridine synthase family protein RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7-like RNA pseudouridine synthase 7-like RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7-like RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 RNA pseudouridine synthase 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00061 Fatty acid biosynthesis 2
bra00780 Biotin metabolism 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00402 Benzoxazinoid biosynthesis 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00402 Benzoxazinoid biosynthesis 2
tae00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835188 103857197 103852163 125581912 106345873 106387919 107949602 121215504 102628313 100811500 100255954 7454741 11424387 101254284 102599479 107789965 107791949 9269812 100217137 123105416 123113687 123123215 123452724 110435137 100830962 5717281
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