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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G63440   hypothetical protein (DUF167) 
 ath-r.7   AT5G63440   hypothetical protein (DUF167) 
 ath-m.9   AT5G63440   hypothetical protein (DUF167) 
 ath-e.2   AT5G63440   hypothetical protein (DUF167) 
 ath-m.4.bio   AT5G63440   hypothetical protein (DUF167) 
 ath-m.4.hor   AT5G63440   hypothetical protein (DUF167) 
 ath-m.4.lig   AT5G63440   hypothetical protein (DUF167) 
 ath-m.4.str   AT5G63440   hypothetical protein (DUF167) 
 ath-m.4.tis   AT5G63440   hypothetical protein (DUF167) 
 gma-u.5   100306581   PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like 
 vvi-u.5   100247416   UPF0235 protein At5g63440 
 ppo-u.5   7484469   UPF0235 protein At5g63440 
 ppo-u.5   7463120   UPF0235 protein At5g63440 
 mtr-u.5   112417490   UPF0235 protein At5g63440 
 sly-u.5   101262801   UPF0235 protein At5g63440 
 osa-u.5   4342960   UPF0235 protein At5g63440 
 zma-u.5   100193457   uncharacterized LOC100193457 

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Top 50 coexpressed genes to AT5G63440 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G63440 (ath-u.5 coexpression data)

CoexMap"836463"


athAT5G63440 | Entrez gene ID : 836463      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097167 [list] [network] circadian regulation of translation  (1 genes)  IMP  
GO:2000306 [list] [network] positive regulation of photomorphogenesis  (8 genes)  IGI IMP  
GO:0009640 [list] [network] photomorphogenesis  (77 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078789.1 [sequence] [blastp]
NP_568972.2 [sequence] [blastp]
NP_851256.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 1  (predict for NP_001078789.1)
chlo 3,  plas 3,  mito 1,  pero 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_568972.2)
chlo 3,  cyto 3,  plas 2,  nucl 1,  mito 1,  pero 1  (predict for NP_851256.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for NP_001078789.1)
other 9  (predict for NP_568972.2)
other 9  (predict for NP_851256.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G63440

.
ath-r.7
for
AT5G63440

.
ath-m.9
for
AT5G63440

.
ath-e.2
for
AT5G63440

.
ath-m.4.bio
for
AT5G63440

.
ath-m.4.hor
for
AT5G63440

.
ath-m.4.lig
for
AT5G63440

.
ath-m.4.str
for
AT5G63440

.
ath-m.4.tis
for
AT5G63440

.
gma-u.5
for
100306581

.
vvi-u.5
for
100247416

.
ppo-u.5
for
7484469

.
ppo-u.5
for
7463120

.
mtr-u.5
for
112417490

.
sly-u.5
for
101262801

.
osa-u.5
for
4342960

.
zma-u.5
for
100193457

.


Ortholog ID: 10415
Species ath gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G63440 LOC100306581 LOC101262801 LOC4342960 LOC100193457 LOC103873755 LOC100247416 LOC7484469 LOC7463120 LOC112417490 LOC123051582 LOC123187518 LOC123424746 LOC107950188 LOC107886246 LOC111208809 LOC106347910 CHLRE_12g485750v5 LOC110432206 LOC102584183 LOC102608618 LOC100832887 LOC107782093 LOC107814906
Function* hypothetical protein (DUF167) PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like UPF0235 protein At5g63440 UPF0235 protein At5g63440 uncharacterized LOC100193457 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440-like uncharacterized protein UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 6
cre00190 Oxidative phosphorylation 6
cre04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit00190 Oxidative phosphorylation 4
cit04120 Ubiquitin mediated proteolysis 3
cit03420 Nucleotide excision repair 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836463 100306581 101262801 4342960 100193457 103873755 100247416 7484469 7463120 112417490 123051582 123187518 123424746 107950188 107886246 111208809 106347910 5716614 110432206 102584183 102608618 100832887 107782093 107814906
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