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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   FAC19   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT2G26790   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100775312   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 vvi-u.5   100243250   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 ppo-u.5   7494379   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 mtr-u.5   25489783   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 mtr-u.5   11420328   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 sly-u.5   101266822   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 

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Top 50 coexpressed genes to FAC19 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAC19 (ath-u.5 coexpression data)

CoexMap"837941"


athFAC19 | Entrez gene ID : 837941      
Species ath gma vvi ppo mtr sly hvu osa sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 10 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001318997.1 [sequence] [blastp]
NP_172835.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 2  (predict for NP_001318997.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 2  (predict for NP_172835.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001318997.1)
mito 8  (predict for NP_172835.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FAC19

.
ath-r.7
for
FAC19

.
ath-m.9
for
FAC19

.
ath-e.2
for
FAC19

.
ath-m.4.bio
for
FAC19

.
ath-m.4.hor
for
FAC19

.
ath-m.4.lig
for
FAC19

.
ath-m.4.str
for
FAC19

.
ath-m.4.tis
for
FAC19

.
ath-u.5
for
AT2G26790

.
gma-u.5
for
100775312

.
vvi-u.5
for
100243250

.
ppo-u.5
for
7494379

.
mtr-u.5
for
25489783

.
mtr-u.5
for
11420328

.
sly-u.5
for
101266822

.


Ortholog ID: 11657
Species ath ath gma sly bra bra vvi ppo mtr mtr ghi ghi sot cit cit nta
Symbol FAC19 AT2G26790 LOC100775312 LOC101266822 LOC103872080 LOC103829634 LOC100243250 LOC7494379 LOC25489783 LOC11420328 LOC107959576 LOC107959433 LOC102582865 LOC102617622 LOC102617497 LOC107780386
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial putative pentatricopeptide repeat-containing protein At1g13800 pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like uncharacterized LOC107780386
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837941 817220 100775312 101266822 103872080 103829634 100243250 7494379 25489783 11420328 107959576 107959433 102582865 102617622 102617497 107780386
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