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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G02330   integrator complex subunit-like protein 
 ath-r.7   AT1G02330   integrator complex subunit-like protein 
 ath-m.9   AT1G02330   integrator complex subunit-like protein 
 ath-e.2   AT1G02330   integrator complex subunit-like protein 
 ath-m.4.bio   AT1G02330   integrator complex subunit-like protein 
 ath-m.4.hor   AT1G02330   integrator complex subunit-like protein 
 ath-m.4.lig   AT1G02330   integrator complex subunit-like protein 
 ath-m.4.str   AT1G02330   integrator complex subunit-like protein 
 ath-m.4.tis   AT1G02330   integrator complex subunit-like protein 
 bra-r.6   103844598   protein COP1 SUPPRESSOR 2 
 bna-r.1   BNAC05G01090D   protein COP1 SUPPRESSOR 2 
 bna-r.1   BNAA10G00980D   protein COP1 SUPPRESSOR 2 
 ghi-r.1   107912287   protein COP1 SUPPRESSOR 2 
 ghi-r.1   121209747   protein COP1 SUPPRESSOR 2 
 cit-r.1   102617043   hypothetical protein 
 gma-u.5   100812323   uncharacterized LOC100812323 
 gma-u.5   100798791   protein COP1 SUPPRESSOR 2 
 vvi-u.5   100250416   protein COP1 SUPPRESSOR 2 
 ppo-u.5   7486829   protein COP1 SUPPRESSOR 2 
 mtr-u.5   25484718   protein COP1 SUPPRESSOR 2 
 sly-u.5   101252715   COP1 SUPPRESSOR 2-like protein 
 sot-r.1   102603035   uncharacterized protein C9orf78 
 nta-r.1   107810621   protein COP1 SUPPRESSOR 2 
 nta-r.1   107778924   protein COP1 SUPPRESSOR 2 
 osa-u.5   4332947   protein COP1 SUPPRESSOR 2 
 zma-u.5   100282469   uncharacterized LOC100282469 
 tae-r.2   123129107   protein COP1 SUPPRESSOR 2 
 tae-r.2   123129108   protein COP1 SUPPRESSOR 2 
 tae-r.2   123140007   protein COP1 SUPPRESSOR 2 
 hvu-r.1   123403053   protein COP1 SUPPRESSOR 2 
 sbi-r.1   8082281   uncharacterized protein C9orf78 homolog 
 bdi-r.1   100821850   protein COP1 SUPPRESSOR 2 
 cre-r.1   CHLRE_10g423350v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G02330 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G02330 (ath-u.5 coexpression data)

CoexMap"839367"


athAT1G02330 | Entrez gene ID : 839367      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055121 [list] [network] response to high fluence blue light stimulus by blue high-fluence system  (1 genes)  IMP  
GO:0031397 [list] [network] negative regulation of protein ubiquitination  (3 genes)  IDA  
GO:0080022 [list] [network] primary root development  (40 genes)  IMP  
GO:0010099 [list] [network] regulation of photomorphogenesis  (41 genes)  IGI  
GO CC
GO:0016607 [list] [network] nuclear speck  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (22 genes)  IPI  
Protein NP_563649.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for NP_563649.1)
Subcellular
localization
TargetP
other 7  (predict for NP_563649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G02330
ath-r.7
for
AT1G02330
ath-m.9
for
AT1G02330
ath-e.2
for
AT1G02330
ath-m.4.bio
for
AT1G02330
ath-m.4.hor
for
AT1G02330
ath-m.4.lig
for
AT1G02330
ath-m.4.str
for
AT1G02330
ath-m.4.tis
for
AT1G02330
bra-r.6
for
103844598
bna-r.1
for
BNAC05G01090D
bna-r.1
for
BNAA10G00980D
ghi-r.1
for
107912287
ghi-r.1
for
121209747
cit-r.1
for
102617043
gma-u.5
for
100812323
gma-u.5
for
100798791
vvi-u.5
for
100250416
ppo-u.5
for
7486829
mtr-u.5
for
25484718
sly-u.5
for
101252715
sot-r.1
for
102603035
nta-r.1
for
107810621
nta-r.1
for
107778924
osa-u.5
for
4332947
zma-u.5
for
100282469
tae-r.2
for
123129107
tae-r.2
for
123129108
tae-r.2
for
123140007
hvu-r.1
for
123403053
sbi-r.1
for
8082281
bdi-r.1
for
100821850
cre-r.1
for
CHLRE_10g423350v5


Ortholog ID: 8713
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G02330 LOC103844598 BNAC05G01090D BNAA10G00980D LOC107912287 LOC121209747 LOC102617043 LOC100812323 LOC100798791 LOC100250416 LOC7486829 LOC25484718 LOC101252715 LOC102603035 LOC107810621 LOC107778924 LOC4332947 LOC100282469 LOC123129107 LOC123129108 LOC123146272 LOC123403053 LOC8082281 LOC100821850 CHLRE_10g423350v5
Function* integrator complex subunit-like protein protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 hypothetical protein uncharacterized LOC100812323 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 COP1 SUPPRESSOR 2-like protein uncharacterized protein C9orf78 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 uncharacterized LOC100282469 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 protein COP1 SUPPRESSOR 2 uncharacterized protein C9orf78 homolog protein COP1 SUPPRESSOR 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01240 Biosynthesis of cofactors 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 3
hvu00190 Oxidative phosphorylation 2
hvu04142 Lysosome 2
hvu04145 Phagosome 2
hvu01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839367 103844598 106401982 106370923 107912287 121209747 102617043 100812323 100798791 100250416 7486829 25484718 101252715 102603035 107810621 107778924 4332947 100282469 123129107 123129108 123146272 123403053 8082281 100821850 5728230
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