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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GH3.17   Auxin-responsive GH3 family protein 
 ath-r.7   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.9   GH3.17   Auxin-responsive GH3 family protein 
 ath-e.2   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.4.bio   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.4.hor   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.4.lig   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.4.str   GH3.17   Auxin-responsive GH3 family protein 
 ath-m.4.tis   GH3.17   Auxin-responsive GH3 family protein 
 bra-r.6   103838986   indole-3-acetic acid-amido synthetase GH3.17 
 bna-r.1   106417819   indole-3-acetic acid-amido synthetase GH3.17 
 bna-r.1   106413009   indole-3-acetic acid-amido synthetase GH3.17-like 
 ghi-r.1   121203137   indole-3-acetic acid-amido synthetase GH3.17 
 ghi-r.1   107909506   indole-3-acetic acid-amido synthetase GH3.17 
 vvi-u.5   100248869   indole-3-acetic acid-amido synthetase GH3.17 
 osa-u.5   4350632   probable indole-3-acetic acid-amido synthetase GH3.13 
 zma-u.5   103648032   probable indole-3-acetic acid-amido synthetase GH3.13 
 bdi-r.1   100820934   probable indole-3-acetic acid-amido synthetase GH3.13 

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Top 50 coexpressed genes to GH3.17 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GH3.17 (ath-u.5 coexpression data)

CoexMap"839706"


athGH3.17 | Entrez gene ID : 839706      
Species ath bra bna ghi vvi osa zma bdi cit mtr ppo hvu nta gma cre sot tae sbi sly
Paralog 9 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0140964 [list] [network] intracellular auxin homeostasis  (19 genes)  TAS  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0010279 [list] [network] indole-3-acetic acid amido synthetase activity  (6 genes)  IDA  
Protein NP_174134.1 [sequence] [blastp]
NP_849718.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_174134.1)
chlo 6,  chlo_mito 4,  nucl 1,  mito 1  (predict for NP_849718.1)
Subcellular
localization
TargetP
other 8  (predict for NP_174134.1)
other 5,  mito 3  (predict for NP_849718.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GH3.17
ath-r.7
for
GH3.17
ath-m.9
for
GH3.17
ath-e.2
for
GH3.17
ath-m.4.bio
for
GH3.17
ath-m.4.hor
for
GH3.17
ath-m.4.lig
for
GH3.17
ath-m.4.str
for
GH3.17
ath-m.4.tis
for
GH3.17
bra-r.6
for
103838986
bna-r.1
for
106417819
bna-r.1
for
106413009
ghi-r.1
for
121203137
ghi-r.1
for
107909506
vvi-u.5
for
100248869
osa-u.5
for
4350632
zma-u.5
for
103648032
bdi-r.1
for
100820934


Ortholog ID: 12033
Species ath bra bra bna ghi ghi vvi osa zma bdi
Symbol GH3.17 LOC103838986 LOC103829030 LOC106358052 LOC121203137 LOC107909506 LOC100248869 LOC4350632 LOC103648032 LOC100820934
Function* Auxin-responsive GH3 family protein indole-3-acetic acid-amido synthetase GH3.17 indole-3-acetic acid-amido synthetase GH3.17 indole-3-acetic acid-amido synthetase GH3.17 indole-3-acetic acid-amido synthetase GH3.17 indole-3-acetic acid-amido synthetase GH3.17 indole-3-acetic acid-amido synthetase GH3.17 probable indole-3-acetic acid-amido synthetase GH3.13 probable indole-3-acetic acid-amido synthetase GH3.13 probable indole-3-acetic acid-amido synthetase GH3.13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839706 103838986 103829030 106358052 121203137 107909506 100248869 4350632 103648032 100820934
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