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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ATSYP24   syntaxin 
 ath-m.4.bio   ATSYP24   syntaxin 
 ath-m.4.hor   ATSYP24   syntaxin 
 ath-m.4.lig   ATSYP24   syntaxin 
 ath-m.4.str   ATSYP24   syntaxin 
 ath-m.4.tis   ATSYP24   syntaxin 
 ath-u.5   SYP23   syntaxin of plants 23 
 ath-u.5   SYP21   syntaxin of plants 21 
 ath-u.5   VAM3   Syntaxin/t-SNARE family protein 
 gma-u.5   547656   syntaxin 
 gma-u.5   100787141   syntaxin-22 
 gma-u.5   100796477   syntaxin-22 
 vvi-u.5   100257399   syntaxin-22 
 vvi-u.5   100254896   syntaxin-22 
 vvi-u.5   100249411   syntaxin-22 
 ppo-u.5   7462007   syntaxin-22 
 ppo-u.5   18094134   syntaxin-22 
 ppo-u.5   7456087   syntaxin-22 
 mtr-u.5   11427617   syntaxin-22 
 mtr-u.5   11443508   syntaxin-22 
 mtr-u.5   11424830   syntaxin-22 
 sly-u.5   101264234   syntaxin-22-like 
 sly-u.5   101264438   syntaxin-22 
 sly-u.5   101259184   syntaxin-22 
 osa-u.5   4330446   syntaxin-22 
 osa-u.5   4327713   syntaxin-22 
 zma-u.5   100383665   uncharacterized LOC100383665 
 zma-u.5   100194315   uncharacterized LOC100194315 
 zma-u.5   100191223   Syntaxin 23 

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Top 50 coexpressed genes to ATSYP24 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATSYP24 (ath-m.9 coexpression data)

CoexMap"840119"


athATSYP24 | Entrez gene ID : 840119      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (9 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001320542.1 [sequence] [blastp]
NP_174506.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001320542.1)
nucl 4,  chlo 1,  vacu 1,  cyto 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_174506.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001320542.1)
other 5  (predict for NP_174506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ATSYP24
ath-m.4.bio
for
ATSYP24
ath-m.4.hor
for
ATSYP24
ath-m.4.lig
for
ATSYP24
ath-m.4.str
for
ATSYP24
ath-m.4.tis
for
ATSYP24
ath-u.5
for
SYP23
ath-u.5
for
SYP21
ath-u.5
for
VAM3
gma-u.5
for
547656
gma-u.5
for
100787141
gma-u.5
for
100796477
vvi-u.5
for
100257399
vvi-u.5
for
100254896
vvi-u.5
for
100249411
ppo-u.5
for
7462007
ppo-u.5
for
18094134
ppo-u.5
for
7456087
mtr-u.5
for
11427617
mtr-u.5
for
11443508
mtr-u.5
for
11424830
sly-u.5
for
101264234
sly-u.5
for
101264438
sly-u.5
for
101259184
osa-u.5
for
4330446
osa-u.5
for
4327713
zma-u.5
for
100383665
zma-u.5
for
100194315
zma-u.5
for
100191223


Ortholog ID: 1021
Species ath ath bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol SYP21 SYP23 LOC103856218 LOC106354442 LOC106400025 LOC107946763 LOC107938586 LOC102625557 LOC102610222 LOC100796477 LOC547656 LOC100249411 LOC100257399 LOC18094134 LOC7456087 LOC11427617 LOC11443508 LOC101264438 LOC101264234 LOC102594331 LOC102584384 LOC107796587 LOC107824262 LOC4327713 LOC100194315 LOC100383665 LOC123128113 LOC123137903 LOC123402163 LOC123443398 LOC8085806 LOC8073164 LOC100845480 CHLRE_01g010700v5
Function* syntaxin of plants 21 syntaxin of plants 23 syntaxin-21 syntaxin-21 syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22-like syntaxin-22-like syntaxin-22 syntaxin syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22 syntaxin-22-like syntaxin-22-like syntaxin-22-like syntaxin-22 syntaxin-22-like syntaxin-22 uncharacterized LOC100194315 uncharacterized LOC100383665 syntaxin-22 syntaxin-22 syntaxin-22-like syntaxin-22-like syntaxin-22 syntaxin-22 syntaxin-22 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03022 Basal transcription factors 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 6
gma04382 Cornified envelope formation 6
gma04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04814 Motor proteins 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
mtr00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04130 SNARE interactions in vesicular transport 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04145 Phagosome 4
bdi04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 5
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831546 827494 103856218 106354442 106400025 107946763 107938586 102625557 102610222 100796477 547656 100249411 100257399 18094134 7456087 11427617 11443508 101264438 101264234 102594331 102584384 107796587 107824262 4327713 100194315 100383665 123128113 123137903 123402163 123443398 8085806 8073164 100845480 66051974
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