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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G60420   DC1 domain-containing protein 
 ath-r.7   AT1G60420   DC1 domain-containing protein 
 ath-m.9   AT1G60420   DC1 domain-containing protein 
 ath-e.2   AT1G60420   DC1 domain-containing protein 
 ath-m.4.bio   AT1G60420   DC1 domain-containing protein 
 ath-m.4.hor   AT1G60420   DC1 domain-containing protein 
 ath-m.4.lig   AT1G60420   DC1 domain-containing protein 
 ath-m.4.str   AT1G60420   DC1 domain-containing protein 
 ath-m.4.tis   AT1G60420   DC1 domain-containing protein 
 ath-u.5   AT4G31240   protein kinase C-like zinc finger protein 
 bra-r.6   103852020   probable nucleoredoxin 3 
 bra-r.6   103829793   probable nucleoredoxin 1 
 bna-r.1   106354717   probable nucleoredoxin 3 
 bna-r.1   106375435   probable nucleoredoxin 3 
 bna-r.1   106450042   probable nucleoredoxin 1 
 ghi-r.1   107886589   probable nucleoredoxin 1 
 ghi-r.1   107905541   probable nucleoredoxin 2 
 ghi-r.1   107909674   probable nucleoredoxin 1 
 cit-r.1   102618158   probable nucleoredoxin 1 
 cit-r.1   102618989   probable nucleoredoxin 2 
 cit-r.1   102623459   probable nucleoredoxin 3 
 gma-u.5   100778160   probable nucleoredoxin 3 
 gma-u.5   100815038   thioredoxin-like superfamily protein 
 gma-u.5   100809224   probable nucleoredoxin 1 
 vvi-u.5   109122684   probable nucleoredoxin 1 
 vvi-u.5   100244715   probable nucleoredoxin 1 
 vvi-u.5   100257684   probable nucleoredoxin 3 
 ppo-u.5   7477023   probable nucleoredoxin 1 
 mtr-u.5   25501356   probable nucleoredoxin 1 
 mtr-u.5   11427353   putative protein-disulfide reductase 
 mtr-u.5   11442519   probable nucleoredoxin 2 
 sly-u.5   101250401   probable nucleoredoxin 1 
 sly-u.5   101245840   probable nucleoredoxin 2 
 sot-r.1   102604942   probable nucleoredoxin 1 
 sot-r.1   102606289   probable nucleoredoxin 1 
 sot-r.1   102580139   probable nucleoredoxin 2 
 nta-r.1   107821493   putative nucleoredoxin 1 
 nta-r.1   107761425   putative nucleoredoxin 1 
 nta-r.1   107761428   putative nucleoredoxin 1 
 osa-u.5   4336932   probable nucleoredoxin 3 
 osa-u.5   4333077   probable nucleoredoxin 1-2 
 osa-u.5   4333075   probable nucleoredoxin 1-1 
 zma-u.5   100192725   uncharacterized LOC100192725 
 zma-u.5   542360   nucleoredoxin 1 
 zma-u.5   100191960   putative nucleoredoxin 1 
 tae-r.2   123054624   probable nucleoredoxin 1-2 
 tae-r.2   123046770   probable nucleoredoxin 1-2 
 tae-r.2   123062291   probable nucleoredoxin 2 
 hvu-r.1   123440362   probable nucleoredoxin 2 
 hvu-r.1   123427791   probable nucleoredoxin 1-2 
 sbi-r.1   8080431   probable nucleoredoxin 1-1 
 sbi-r.1   8055234   probable nucleoredoxin 2 
 sbi-r.1   8072312   probable nucleoredoxin 3 
 bdi-r.1   100841918   probable nucleoredoxin 1-2 
 bdi-r.1   100832744   probable nucleoredoxin 2 
 bdi-r.1   100837204   probable nucleoredoxin 1-2 
 cre-r.1   CHLRE_02g093800v5   uncharacterized protein 
 cre-r.1   CHLRE_16g647534v5   uncharacterized protein 
 cre-r.1   CHLRE_02g094100v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G60420 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G60420 (ath-u.5 coexpression data)

CoexMap"842337"


athAT1G60420 | Entrez gene ID : 842337      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 3 3 3 1 3 2 3 3 3 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080092 [list] [network] regulation of pollen tube growth  (40 genes)  IMP  
GO:0010183 [list] [network] pollen tube guidance  (50 genes)  IMP  
GO:0009860 [list] [network] pollen tube growth  (151 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0004791 [list] [network] thioredoxin-disulfide reductase (NADPH) activity  (5 genes)  IEA  
Protein NP_564756.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 2,  chlo 1,  plas 1  (predict for NP_564756.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G60420
ath-r.7
for
AT1G60420
ath-m.9
for
AT1G60420
ath-e.2
for
AT1G60420
ath-m.4.bio
for
AT1G60420
ath-m.4.hor
for
AT1G60420
ath-m.4.lig
for
AT1G60420
ath-m.4.str
for
AT1G60420
ath-m.4.tis
for
AT1G60420
ath-u.5
for
AT4G31240
bra-r.6
for
103852020
bra-r.6
for
103829793
bna-r.1
for
106354717
bna-r.1
for
106375435
bna-r.1
for
106450042
ghi-r.1
for
107886589
ghi-r.1
for
107905541
ghi-r.1
for
107909674
cit-r.1
for
102618158
cit-r.1
for
102618989
cit-r.1
for
102623459
gma-u.5
for
100778160
gma-u.5
for
100815038
gma-u.5
for
100809224
vvi-u.5
for
109122684
vvi-u.5
for
100244715
vvi-u.5
for
100257684
ppo-u.5
for
7477023
mtr-u.5
for
25501356
mtr-u.5
for
11427353
mtr-u.5
for
11442519
sly-u.5
for
101250401
sly-u.5
for
101245840
sot-r.1
for
102604942
sot-r.1
for
102606289
sot-r.1
for
102580139
nta-r.1
for
107821493
nta-r.1
for
107761425
nta-r.1
for
107761428
osa-u.5
for
4336932
osa-u.5
for
4333077
osa-u.5
for
4333075
zma-u.5
for
100192725
zma-u.5
for
542360
zma-u.5
for
100191960
tae-r.2
for
123054624
tae-r.2
for
123046770
tae-r.2
for
123062291
hvu-r.1
for
123440362
hvu-r.1
for
123427791
sbi-r.1
for
8080431
sbi-r.1
for
8055234
sbi-r.1
for
8072312
bdi-r.1
for
100841918
bdi-r.1
for
100832744
bdi-r.1
for
100837204
cre-r.1
for
CHLRE_02g093800v5
cre-r.1
for
CHLRE_16g647534v5
cre-r.1
for
CHLRE_02g094100v5


Ortholog ID: 1282
Species ath ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol AT1G60420 AT4G31240 LOC103852020 LOC103829793 LOC106354717 LOC106375435 LOC106450042 LOC107905541 LOC107909674 LOC107951375 LOC102618158 LOC102618989 LOC100778160 LOC100809224 LOC100791971 LOC104879711 LOC100852822 LOC100852797 LOC7477023 LOC11427353 LOC11442519 LOC25501353 LOC101250401 LOC101245840 LOC102604942 LOC102606289 LOC102580139 LOC107761425 LOC107761428 LOC107812784 LOC4336932 LOC4333077 LOC4333075 LOC100192725 LOC542360 LOC103642043 LOC123054624 LOC123062291 LOC123071053 LOC123440362 LOC123427791 LOC8080431 LOC8072312 LOC100841918 LOC100832744 LOC100837204 CHLRE_02g093800v5 CHLRE_02g094100v5 CHLRE_02g093750v5
Function* DC1 domain-containing protein protein kinase C-like zinc finger protein probable nucleoredoxin 3 probable nucleoredoxin 1 probable nucleoredoxin 3 probable nucleoredoxin 3 probable nucleoredoxin 1 probable nucleoredoxin 2 probable nucleoredoxin 1 probable nucleoredoxin 3 probable nucleoredoxin 1 probable nucleoredoxin 2 probable nucleoredoxin 3 probable nucleoredoxin 1 probable nucleoredoxin 3 probable nucleoredoxin 1 probable nucleoredoxin 1 probable nucleoredoxin 1 probable nucleoredoxin 1 putative protein-disulfide reductase probable nucleoredoxin 2 probable nucleoredoxin 1 probable nucleoredoxin 1 probable nucleoredoxin 2 probable nucleoredoxin 1 probable nucleoredoxin 1 probable nucleoredoxin 2 putative nucleoredoxin 1 putative nucleoredoxin 1 putative nucleoredoxin 2 probable nucleoredoxin 3 probable nucleoredoxin 1-2 probable nucleoredoxin 1-1 uncharacterized LOC100192725 nucleoredoxin 1 probable nucleoredoxin 3 probable nucleoredoxin 1-2 probable nucleoredoxin 2 probable nucleoredoxin 2 probable nucleoredoxin 2 probable nucleoredoxin 1-2 probable nucleoredoxin 1-1 probable nucleoredoxin 3 probable nucleoredoxin 1-2 probable nucleoredoxin 2 probable nucleoredoxin 1-2 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00561 Glycerolipid metabolism 2
ath00750 Vitamin B6 metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 7
bna00190 Oxidative phosphorylation 4
bna04075 Plant hormone signal transduction 4
bna00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 5
bna00190 Oxidative phosphorylation 4
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna00270 Cysteine and methionine metabolism 4
bna00280 Valine, leucine and isoleucine degradation 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 10
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00360 Phenylalanine metabolism 3
gma00650 Butanoate metabolism 2
gma00052 Galactose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
sly04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot00940 Phenylpropanoid biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
sot04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04145 Phagosome 4
nta04148 Efferocytosis 4
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03272 Virion - Hepatitis viruses 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 6
zma04075 Plant hormone signal transduction 6
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 4
zma00566 Sulfoquinovose metabolism 4
zma00740 Riboflavin metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 5
tae04144 Endocytosis 4
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00020 Citrate cycle (TCA cycle) 2
tae00620 Pyruvate metabolism 2
tae00785 Lipoic acid metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 5
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 5
bdi01212 Fatty acid metabolism 5
bdi00592 alpha-Linolenic acid metabolism 4
bdi04146 Peroxisome 4
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842337 829251 103852020 103829793 106354717 106375435 106450042 107905541 107909674 107951375 102618158 102618989 100778160 100809224 100791971 104879711 100852822 100852797 7477023 11427353 11442519 25501353 101250401 101245840 102604942 102606289 102580139 107761425 107761428 107812784 4336932 4333077 4333075 100192725 542360 103642043 123054624 123062291 123071053 123440362 123427791 8080431 8072312 100841918 100832744 100837204 5727523 5727529 5727522
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