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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-r.7   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.9   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-e.2   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.4.bio   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.4.hor   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.4.lig   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.4.str   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-m.4.tis   CCOAMT   caffeoyl-CoA 3-O-methyltransferase 
 ath-u.5   AT1G24735   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   TSM1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103835436   putative caffeoyl-CoA O-methyltransferase At1g67980 
 bra-r.6   103852437   putative caffeoyl-CoA O-methyltransferase At1g67980 
 bra-r.6   103831219   putative caffeoyl-CoA O-methyltransferase At1g67980 
 bna-r.1   106414755   putative caffeoyl-CoA O-methyltransferase At1g67980 
 bna-r.1   106414501   putative caffeoyl-CoA O-methyltransferase At1g67980 
 bna-r.1   106413953   putative caffeoyl-CoA O-methyltransferase At1g67980 
 ghi-r.1   107898627   flavonoid 3',5'-methyltransferase-like 
 gma-u.5   100813350   flavonoid 3',5'-methyltransferase 
 gma-u.5   100500657   putative caffeoyl-CoA 3-O-methyltransferase 
 vvi-u.5   100250579   flavonoid 3',5'-methyltransferase-like 
 vvi-u.5   100245452   flavonoid 3',5'-methyltransferase-like 
 ppo-u.5   7457813   caffeoyl-CoA O-methyltransferase 
 mtr-u.5   25493460   caffeoyl-CoA O-methyltransferase 5 
 mtr-u.5   25493320   flavonoid 3',5'-methyltransferase 
 mtr-u.5   25493490   caffeoyl-CoA O-methyltransferase 
 sly-u.5   AnthOMT   flavonoid 3',5'-methyltransferase 
 sot-r.1   AOMT3   flavonoid 3',5'-methyltransferase-like 

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Top 50 coexpressed genes to CCOAMT (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CCOAMT (ath-u.5 coexpression data)

CoexMap"843126"


athCCOAMT | Entrez gene ID : 843126      
Species ath bra bna ghi gma vvi ppo mtr sly sot hvu bdi nta osa tae zma cre sbi cit
Paralog 11 3 3 1 2 2 1 3 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00940 [list] [network] Phenylpropanoid biosynthesis (127 genes)
ath00941 [list] [network] Flavonoid biosynthesis (25 genes)
ath00945 [list] [network] Stilbenoid, diarylheptanoid and gingerol biosynthesis (9 genes)
GO BP
GO:0009809 [list] [network] lignin biosynthetic process  (41 genes)  ISS  
GO:0032259 [list] [network] methylation  (78 genes)  ISS  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  TAS  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0042409 [list] [network] caffeoyl-CoA O-methyltransferase activity  (6 genes)  ISS  
Protein NP_564916.2 [sequence] [blastp]
NP_974104.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 2,  mito 1  (predict for NP_564916.2)
mito 7,  chlo_mito 5,  chlo 1  (predict for NP_974104.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564916.2)
mito 6,  scret 4  (predict for NP_974104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CCOAMT
ath-r.7
for
CCOAMT
ath-m.9
for
CCOAMT
ath-e.2
for
CCOAMT
ath-m.4.bio
for
CCOAMT
ath-m.4.hor
for
CCOAMT
ath-m.4.lig
for
CCOAMT
ath-m.4.str
for
CCOAMT
ath-m.4.tis
for
CCOAMT
ath-u.5
for
AT1G24735
ath-u.5
for
TSM1
bra-r.6
for
103835436
bra-r.6
for
103852437
bra-r.6
for
103831219
bna-r.1
for
106414755
bna-r.1
for
106414501
bna-r.1
for
106413953
ghi-r.1
for
107898627
gma-u.5
for
100813350
gma-u.5
for
100500657
vvi-u.5
for
100250579
vvi-u.5
for
100245452
ppo-u.5
for
7457813
mtr-u.5
for
25493460
mtr-u.5
for
25493320
mtr-u.5
for
25493490
sly-u.5
for
AnthOMT
sot-r.1
for
AOMT3


Ortholog ID: 5206
Species ath ath ath bra bra bna bna ghi ghi gma gma vvi vvi ppo mtr mtr mtr sly sot
Symbol CCOAMT AT1G24735 TSM1 LOC103835436 LOC103833446 LOC106361880 LOC106359564 LOC107898627 LOC107933317 LOC100813350 LOC100500657 LOC100245452 FAOMT LOC7457813 LOC25493460 LOC25493320 LOC25493490 AnthOMT AOMT3
Function* caffeoyl-CoA 3-O-methyltransferase S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein putative caffeoyl-CoA O-methyltransferase At1g67980 putative caffeoyl-CoA O-methyltransferase At1g67980 putative caffeoyl-CoA O-methyltransferase At1g67980 putative caffeoyl-CoA O-methyltransferase At1g67980 flavonoid 3',5'-methyltransferase-like flavonoid 3',5'-methyltransferase flavonoid 3',5'-methyltransferase putative caffeoyl-CoA 3-O-methyltransferase flavonoid 3',5'-methyltransferase-like anthocyanin O-methyltransferase caffeoyl-CoA O-methyltransferase caffeoyl-CoA O-methyltransferase 5 flavonoid 3',5'-methyltransferase caffeoyl-CoA O-methyltransferase flavonoid 3',5'-methyltransferase flavonoid 3',5'-methyltransferase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 4
bra00640 Propanoate metabolism 4
bra01200 Carbon metabolism 4
bra00061 Fatty acid biosynthesis 3
bra01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 5
bna00941 Flavonoid biosynthesis 5
bna00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 5
bna00941 Flavonoid biosynthesis 5
bna00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 10
ghi00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 10
ghi00360 Phenylalanine metabolism 4
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma00943 Isoflavonoid biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00944 Flavone and flavonol biosynthesis 8
vvi00941 Flavonoid biosynthesis 5
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00944 Flavone and flavonol biosynthesis 7
vvi00941 Flavonoid biosynthesis 4
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 6
mtr00941 Flavonoid biosynthesis 4
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 5
mtr00940 Phenylpropanoid biosynthesis 4
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
mtr01240 Biosynthesis of cofactors 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 4
sly00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot00944 Flavone and flavonol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843126 839082 843127 103835436 103833446 106361880 106359564 107898627 107933317 100813350 100500657 100245452 100233134 7457813 25493460 25493320 25493490 101255734 102599242
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