ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-r.7	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.9	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-e.2	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.4.bio	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.4.hor	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.4.lig	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.4.str	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-m.4.tis	AOAT2	alanine-2-oxoglutarate aminotransferase 2
ath-u.5	AlaAT1	alanine aminotransferas
ath-u.5	GGT1	glutamate:glyoxylate aminotransferase
ath-u.5	ALAAT2	alanine aminotransferase 2
gma-u.5	100776235	alanine aminotransferase 2
gma-u.5	100787173	glutamate--glyoxylate aminotransferase 2
gma-u.5	ALAAT1	alanine aminotransferase 1
vvi-u.5	100241156	alanine aminotransferase 2
vvi-u.5	100261274	AlaT1
ppo-u.5	7469050	glutamate--glyoxylate aminotransferase 2
ppo-u.5	18094672	alanine aminotransferase 1, mitochondrial
ppo-u.5	7461955	alanine aminotransferase 2
mtr-u.5	11444017	alanine aminotransferase 2
mtr-u.5	11409437	glutamate--glyoxylate aminotransferase 2
sly-u.5	101260239	alanine aminotransferase 2
sly-u.5	101251709	glutamate--glyoxylate aminotransferase 2-like
sly-u.5	101246035	alanine aminotransferase 2
osa-u.5	4347138	alanine aminotransferase 2
osa-u.5	4348524	alanine aminotransferase 2
osa-u.5	4348525	alanine aminotransferase 2
zma-u.5	100384793	alanine aminotransferase 2
zma-u.5	100284842	uncharacterized LOC100284842
zma-u.5	100280822	alanine aminotransferase 2

Top 50 coexpressed genes to AOAT2 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AOAT2 (ath-u.5 coexpression data)

CoexMap"843395"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00220 [list] [network] Arginine biosynthesis (38 genes)

ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)

ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)

ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (81 genes)

ath00710 [list] [network] Carbon fixation by Calvin cycle (71 genes)

ath01200 [list] [network] Carbon metabolism (275 genes)

ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (103 genes)

ath01230 [list] [network] Biosynthesis of amino acids (242 genes)

GO BP

GO:0009853 [list] [network] photorespiration	(38 genes)	ISS
GO:0009058 [list] [network] biosynthetic process	(3221 genes)	IEA

GO CC

GO:0005777 [list] [network] peroxisome	(313 genes)	HDA IDA ISS
GO:0009570 [list] [network] chloroplast stroma	(693 genes)	HDA
GO:0005829 [list] [network] cytosol	(2593 genes)	HDA RCA
GO:0005739 [list] [network] mitochondrion	(4244 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0047958 [list] [network] glycine:2-oxoglutarate aminotransferase activity	(2 genes)	IDA ISS
GO:0004021 [list] [network] L-alanine:2-oxoglutarate aminotransferase activity	(5 genes)	IDA
GO:0008453 [list] [network] alanine-glyoxylate transaminase activity	(5 genes)	IDA
GO:0003729 [list] [network] mRNA binding	(1514 genes)	IDA

Protein

NP_001031262.1 [sequence] [blastp]
NP_001031263.1 [sequence] [blastp]
NP_177215.1 [sequence] [blastp]
NP_974122.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, pero 3, cyto_nucl 3	(predict for NP_001031262.1)
cyto 5, pero 3, cyto_nucl 3	(predict for NP_001031263.1)
cyto 5, pero 3, cyto_nucl 3	(predict for NP_177215.1)
cyto 5, pero 3, cyto_nucl 3	(predict for NP_974122.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001031262.1)
other 8	(predict for NP_001031263.1)
other 8	(predict for NP_177215.1)
other 8	(predict for NP_974122.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AOAT2	ath-r.7 for AOAT2	ath-m.9 for AOAT2	ath-e.2 for AOAT2	ath-m.4.bio for AOAT2	ath-m.4.hor for AOAT2	ath-m.4.lig for AOAT2	ath-m.4.str for AOAT2	ath-m.4.tis for AOAT2	ath-u.5 for AlaAT1	ath-u.5 for GGT1	ath-u.5 for ALAAT2	gma-u.5 for 100776235	gma-u.5 for 100787173	gma-u.5 for ALAAT1	vvi-u.5 for 100241156	vvi-u.5 for 100261274	ppo-u.5 for 7469050	ppo-u.5 for 18094672	ppo-u.5 for 7461955	mtr-u.5 for 11444017	mtr-u.5 for 11409437	sly-u.5 for 101260239	sly-u.5 for 101251709	sly-u.5 for 101246035	osa-u.5 for 4347138	osa-u.5 for 4348524	osa-u.5 for 4348525	zma-u.5 for 100384793	zma-u.5 for 100284842	zma-u.5 for 100280822

Ortholog

Ortholog ID: 781

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

GGT1

ALAAT2

ALAAT1

Function^*

glutamate:glyoxylate aminotransferase

alanine aminotransferase 2

alanine aminotransferase 1, mitochondrial

glutamate--glyoxylate aminotransferase 1

glutamate--glyoxylate aminotransferase 1-like

glutamate--glyoxylate aminotransferase 2

alanine aminotransferase 2, mitochondrial

glutamate--glyoxylate aminotransferase 2

alanine aminotransferase 2

alanine aminotransferase 1

alanine aminotransferase 2

AlaT1

alanine aminotransferase 2

alanine aminotransferase 1, mitochondrial

glutamate--glyoxylate aminotransferase 2

alanine aminotransferase 2

glutamate--glyoxylate aminotransferase 2

alanine aminotransferase 2-like

alanine aminotransferase 2, mitochondrial

alanine aminotransferase 2

alanine aminotransferase10

alanine aminotransferase 2

alanine aminotransferase 2-like

glutamate--glyoxylate aminotransferase 2

alanine aminotransferase 2

glutamate--glyoxylate aminotransferase 1-like

alanine aminotransferase 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	11
ath00630	Glyoxylate and dicarboxylate metabolism	9
ath00710	Carbon fixation by Calvin cycle	6
ath00260	Glycine, serine and threonine metabolism	5
ath01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	2
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	6
bra01230	Biosynthesis of amino acids	6
bra00710	Carbon fixation by Calvin cycle	5
bra01210	2-Oxocarboxylic acid metabolism	3
bra00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	4
bra01200	Carbon metabolism	4
bra00260	Glycine, serine and threonine metabolism	3
bra00230	Purine metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00220	Arginine biosynthesis	5
bna00250	Alanine, aspartate and glutamate metabolism	5
bna00260	Glycine, serine and threonine metabolism	5
bna00630	Glyoxylate and dicarboxylate metabolism	5
bna00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00220	Arginine biosynthesis	5
bna00250	Alanine, aspartate and glutamate metabolism	5
bna00260	Glycine, serine and threonine metabolism	5
bna00630	Glyoxylate and dicarboxylate metabolism	5
bna00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi01200	Carbon metabolism	4
ghi00380	Tryptophan metabolism	4
ghi00040	Pentose and glucuronate interconversions	2
ghi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi01200	Carbon metabolism	4
ghi00380	Tryptophan metabolism	4
ghi00040	Pentose and glucuronate interconversions	2
ghi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	11
cit01230	Biosynthesis of amino acids	10
cit01200	Carbon metabolism	9
cit00710	Carbon fixation by Calvin cycle	5
cit00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	6
cit00710	Carbon fixation by Calvin cycle	5
cit00195	Photosynthesis	4
cit01230	Biosynthesis of amino acids	3
cit00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	14
gma00010	Glycolysis / Gluconeogenesis	11
gma00710	Carbon fixation by Calvin cycle	11
gma01230	Biosynthesis of amino acids	10
gma00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	13
gma01210	2-Oxocarboxylic acid metabolism	10
gma01230	Biosynthesis of amino acids	10
gma00020	Citrate cycle (TCA cycle)	6
gma00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	16
vvi01230	Biosynthesis of amino acids	15
vvi00010	Glycolysis / Gluconeogenesis	13
vvi00710	Carbon fixation by Calvin cycle	8
vvi00030	Pentose phosphate pathway	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	9
vvi00630	Glyoxylate and dicarboxylate metabolism	6
vvi00260	Glycine, serine and threonine metabolism	4
vvi00710	Carbon fixation by Calvin cycle	4
vvi01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	7
ppo00020	Citrate cycle (TCA cycle)	6
ppo01210	2-Oxocarboxylic acid metabolism	6
ppo00620	Pyruvate metabolism	4
ppo00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00260	Glycine, serine and threonine metabolism	3
mtr00630	Glyoxylate and dicarboxylate metabolism	3
mtr01200	Carbon metabolism	3
mtr00670	One carbon pool by folate	2
mtr00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	14
mtr00010	Glycolysis / Gluconeogenesis	10
mtr01230	Biosynthesis of amino acids	10
mtr00710	Carbon fixation by Calvin cycle	7
mtr01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00220	Arginine biosynthesis	3
sly00250	Alanine, aspartate and glutamate metabolism	3
sly00710	Carbon fixation by Calvin cycle	3
sly01200	Carbon metabolism	3
sly01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	7
sly00630	Glyoxylate and dicarboxylate metabolism	5
sly00710	Carbon fixation by Calvin cycle	4
sly00260	Glycine, serine and threonine metabolism	4
sly01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	5
sot00630	Glyoxylate and dicarboxylate metabolism	4
sot00710	Carbon fixation by Calvin cycle	3
sot00260	Glycine, serine and threonine metabolism	3
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	8
sot01230	Biosynthesis of amino acids	7
sot00710	Carbon fixation by Calvin cycle	6
sot01210	2-Oxocarboxylic acid metabolism	5
sot00220	Arginine biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	10
nta01210	2-Oxocarboxylic acid metabolism	10
nta00020	Citrate cycle (TCA cycle)	6
nta00785	Lipoic acid metabolism	6
nta00310	Lysine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	6
nta01210	2-Oxocarboxylic acid metabolism	6
nta00220	Arginine biosynthesis	4
nta00250	Alanine, aspartate and glutamate metabolism	4
nta00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	11
zma00020	Citrate cycle (TCA cycle)	10
zma01210	2-Oxocarboxylic acid metabolism	8
zma00785	Lipoic acid metabolism	5
zma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	8
zma00052	Galactose metabolism	4
zma00520	Amino sugar and nucleotide sugar metabolism	4
zma01250	Biosynthesis of nucleotide sugars	4
zma00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	9
tae01230	Biosynthesis of amino acids	9
tae00010	Glycolysis / Gluconeogenesis	8
tae00710	Carbon fixation by Calvin cycle	5
tae00051	Fructose and mannose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	10
tae00020	Citrate cycle (TCA cycle)	6
tae00640	Propanoate metabolism	6
tae00190	Oxidative phosphorylation	6
tae01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	11
hvu01200	Carbon metabolism	7
hvu00020	Citrate cycle (TCA cycle)	5
hvu01210	2-Oxocarboxylic acid metabolism	4
hvu01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	6
hvu00630	Glyoxylate and dicarboxylate metabolism	5
hvu00710	Carbon fixation by Calvin cycle	3
hvu00260	Glycine, serine and threonine metabolism	3
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	10
sbi01230	Biosynthesis of amino acids	10
sbi00010	Glycolysis / Gluconeogenesis	8
sbi00710	Carbon fixation by Calvin cycle	5
sbi01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	8
bdi00020	Citrate cycle (TCA cycle)	6
bdi03050	Proteasome	6
bdi01210	2-Oxocarboxylic acid metabolism	5
bdi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	6
cre00270	Cysteine and methionine metabolism	5
cre01200	Carbon metabolism	4
cre01240	Biosynthesis of cofactors	4
cre00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00630	Glyoxylate and dicarboxylate metabolism	8
cre01200	Carbon metabolism	8
cre00260	Glycine, serine and threonine metabolism	7
cre00670	One carbon pool by folate	3
cre01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

838940

843565

103872517

103840779

106440992

106401320

121219607

107909695

102620489

102611899

100776235

100127413

100241156

100261274

7461955

18094672

11409437

11444017

101246035

101265236

102586190

102588758

107800103

107795521

4347138

9266500

100384793

100279149

123190806

123052079

123425293

123426353

110429736

110432565

100842828

100824435

5720984

5724070

The preparation time of this page was 0.1 [sec].


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	12	3	2	3	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AOAT2 (ath-u.5 coexpression data)

Top 50 enrichment test to AOAT2 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**