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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PIN1   Auxin efflux carrier family protein 
 ath-r.7   PIN1   Auxin efflux carrier family protein 
 ath-m.9   PIN1   Auxin efflux carrier family protein 
 ath-e.2   PIN1   Auxin efflux carrier family protein 
 ath-m.4.bio   PIN1   Auxin efflux carrier family protein 
 ath-m.4.hor   PIN1   Auxin efflux carrier family protein 
 ath-m.4.lig   PIN1   Auxin efflux carrier family protein 
 ath-m.4.str   PIN1   Auxin efflux carrier family protein 
 ath-m.4.tis   PIN1   Auxin efflux carrier family protein 
 ath-u.5   EIR1   Auxin efflux carrier family protein 
 bra-r.6   103856772   auxin efflux carrier component 2 
 bna-r.1   106375096   auxin efflux carrier component 2-like 
 bna-r.1   106381310   auxin efflux carrier component 1 
 bna-r.1   106381354   auxin efflux carrier component 1-like 
 ghi-r.1   107925879   probable auxin efflux carrier component 1c 
 ghi-r.1   121211249   probable auxin efflux carrier component 1c 
 ghi-r.1   107942411   auxin efflux carrier component 1-like 
 cit-r.1   102622023   probable auxin efflux carrier component 1c 
 cit-r.1   102611500   probable auxin efflux carrier component 1b 
 gma-u.5   PIN2B   auxin efflux carrier component 2b 
 gma-u.5   PIN1C   auxin efflux carrier component 1c 
 gma-u.5   PIN1B   auxin efflux carrier component 1b 
 vvi-u.5   100258578   probable auxin efflux carrier component 1b 
 vvi-u.5   100249181   auxin efflux carrier component 1-like 
 ppo-u.5   7464092   probable auxin efflux carrier component 1b 
 ppo-u.5   7474822   probable auxin efflux carrier component 1c 
 mtr-u.5   11414798   probable auxin efflux carrier component 1d 
 mtr-u.5   11427544   probable auxin efflux carrier component 1c 
 mtr-u.5   11441751   auxin efflux carrier component 2 
 sly-u.5   PIN7   auxin efflux carrier component 7 
 sly-u.5   PIN9   auxin efflux carrier component 9 
 sly-u.5   PIN2   auxin efflux carrier component 2 
 sot-r.1   102596833   probable auxin efflux carrier component 1c 
 sot-r.1   102583064   auxin efflux carrier component 2 
 sot-r.1   102588079   probable auxin efflux carrier component 1b 
 nta-r.1   107830898   putative auxin efflux carrier component 1c 
 nta-r.1   107812065   auxin efflux carrier component 2 
 nta-r.1   107818413   auxin efflux carrier component 1-like 
 osa-u.5   4351432   probable auxin efflux carrier component 1d 
 osa-u.5   PIN1A   auxin efflux carrier component 1a-like 
 osa-u.5   4341736   auxin efflux carrier component 2-like 
 zma-u.5   103637824   probable auxin efflux carrier component 1c 
 zma-u.5   109942375   auxin efflux carrier component 2 
 zma-u.5   103627718   auxin efflux carrier component 1a 
 tae-r.2   123086397   probable auxin efflux carrier component 1b 
 tae-r.2   123091647   probable auxin efflux carrier component 1b 
 tae-r.2   123145506   auxin efflux carrier component 1a 
 hvu-r.1   123402189   auxin efflux carrier component 1a 
 hvu-r.1   123409789   probable auxin efflux carrier component 1c 
 hvu-r.1   123412647   auxin efflux carrier component 2 
 sbi-r.1   8069375   auxin efflux carrier component 2 
 sbi-r.1   8085610   probable auxin efflux carrier component 1b 
 sbi-r.1   8057886   probable auxin efflux carrier component 1c 
 bdi-r.1   100838836   probable auxin efflux carrier component 1b 
 bdi-r.1   100830708   probable auxin efflux carrier component 1c 
 bdi-r.1   100842832   auxin efflux carrier component 2 

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Top 50 coexpressed genes to PIN1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PIN1 (ath-u.5 coexpression data)

CoexMap"843693"


athPIN1 | Entrez gene ID : 843693      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 3 3 2 3 2 2 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010338 [list] [network] leaf formation  (4 genes)  IGI  
GO:0048830 [list] [network] adventitious root development  (7 genes)  IMP  
GO:0010358 [list] [network] leaf shaping  (8 genes)  IMP  
GO:0010315 [list] [network] auxin export across the plasma membrane  (15 genes)  IDA  
GO:0010262 [list] [network] somatic embryogenesis  (27 genes)  IMP  
GO:0048826 [list] [network] cotyledon morphogenesis  (27 genes)  IMP  
GO:0010229 [list] [network] inflorescence development  (31 genes)  IMP  
GO:0048825 [list] [network] cotyledon development  (61 genes)  IGI  
GO:0010051 [list] [network] xylem and phloem pattern formation  (69 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (77 genes)  TAS  
GO:0060918 [list] [network] auxin transport  (100 genes)  IMP  
GO:0009630 [list] [network] gravitropism  (101 genes)  IMP  
GO:0009908 [list] [network] flower development  (378 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (800 genes)  IMP  
GO CC
GO:0009925 [list] [network] basal plasma membrane  (5 genes)  IDA  
GO:0010168 [list] [network] ER body  (11 genes)  IDA  
GO:0016324 [list] [network] apical plasma membrane  (32 genes)  IDA  
GO:0045177 [list] [network] apical part of cell  (34 genes)  IDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0071944 [list] [network] cell periphery  (3051 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0010329 [list] [network] auxin efflux transmembrane transporter activity  (16 genes)  IDA IMP  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_177500.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  E.R. 1,  cyto 1,  vacu 1  (predict for NP_177500.1)
Subcellular
localization
TargetP
scret 7,  other 5  (predict for NP_177500.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PIN1
ath-r.7
for
PIN1
ath-m.9
for
PIN1
ath-e.2
for
PIN1
ath-m.4.bio
for
PIN1
ath-m.4.hor
for
PIN1
ath-m.4.lig
for
PIN1
ath-m.4.str
for
PIN1
ath-m.4.tis
for
PIN1
ath-u.5
for
EIR1
bra-r.6
for
103856772
bna-r.1
for
106375096
bna-r.1
for
106381310
bna-r.1
for
106381354
ghi-r.1
for
107925879
ghi-r.1
for
121211249
ghi-r.1
for
107942411
cit-r.1
for
102622023
cit-r.1
for
102611500
gma-u.5
for
PIN2B
gma-u.5
for
PIN1C
gma-u.5
for
PIN1B
vvi-u.5
for
100258578
vvi-u.5
for
100249181
ppo-u.5
for
7464092
ppo-u.5
for
7474822
mtr-u.5
for
11414798
mtr-u.5
for
11427544
mtr-u.5
for
11441751
sly-u.5
for
PIN7
sly-u.5
for
PIN9
sly-u.5
for
PIN2
sot-r.1
for
102596833
sot-r.1
for
102583064
sot-r.1
for
102588079
nta-r.1
for
107830898
nta-r.1
for
107812065
nta-r.1
for
107818413
osa-u.5
for
4351432
osa-u.5
for
PIN1A
osa-u.5
for
4341736
zma-u.5
for
103637824
zma-u.5
for
109942375
zma-u.5
for
103627718
tae-r.2
for
123086397
tae-r.2
for
123091647
tae-r.2
for
123145506
hvu-r.1
for
123402189
hvu-r.1
for
123409789
hvu-r.1
for
123412647
sbi-r.1
for
8069375
sbi-r.1
for
8085610
sbi-r.1
for
8057886
bdi-r.1
for
100838836
bdi-r.1
for
100830708
bdi-r.1
for
100842832


Ortholog ID: 962
Species ath ath bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol PIN1 EIR1 LOC103831832 LOC106381354 LOC106389334 LOC106417987 LOC107942411 LOC107925768 LOC107907377 LOC102622023 LOC102611500 PIN1B PIN1A LOC100820506 LOC100258578 LOC100249181 LOC100263725 LOC7474822 LOC7486726 LOC11414798 LOC11427544 LOC11441751 PIN7 PIN2 PIN1 LOC102583064 LOC102588079 LOC102591513 LOC107830898 LOC107778080 LOC107775627 LOC4351432 LOC4340580 LOC4349716 LOC103637824 LOC109942375 LOC100285745 LOC123086397 LOC123145506 LOC123149334 LOC123409789 LOC123412647 LOC123448210 LOC8085610 LOC8057886 LOC110434954 LOC100838836 LOC100842832 LOC100837998
Function* Auxin efflux carrier family protein Auxin efflux carrier family protein auxin efflux carrier component 1 auxin efflux carrier component 1-like auxin efflux carrier component 2 auxin efflux carrier component 2-like auxin efflux carrier component 1-like probable auxin efflux carrier component 1b auxin efflux carrier component 2-like probable auxin efflux carrier component 1c probable auxin efflux carrier component 1b auxin efflux carrier component 1b auxin efflux carrier component 1a auxin efflux carrier component 1-like probable auxin efflux carrier component 1b auxin efflux carrier component 1-like probable auxin efflux carrier component 1b probable auxin efflux carrier component 1c probable auxin efflux carrier component 1c probable auxin efflux carrier component 1d probable auxin efflux carrier component 1c auxin efflux carrier component 2 auxin efflux carrier component 7 auxin efflux carrier component 2 auxin efflux carrier component 1 auxin efflux carrier component 2 probable auxin efflux carrier component 1b auxin efflux carrier component 1-like putative auxin efflux carrier component 1c putative auxin efflux carrier component 1b putative auxin efflux carrier component 1c probable auxin efflux carrier component 1d probable auxin efflux carrier component 1c probable auxin efflux carrier component 1b probable auxin efflux carrier component 1c auxin efflux carrier component 2 uncharacterized LOC100285745 probable auxin efflux carrier component 1b auxin efflux carrier component 1a auxin efflux carrier component 2 probable auxin efflux carrier component 1c auxin efflux carrier component 2 probable auxin efflux carrier component 1b probable auxin efflux carrier component 1b probable auxin efflux carrier component 1c auxin efflux carrier component 1a probable auxin efflux carrier component 1b auxin efflux carrier component 2 auxin efflux carrier component 1a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843693 835813 103831832 106381354 106389334 106417987 107942411 107925768 107907377 102622023 102611500 100499637 100786572 100820506 100258578 100249181 100263725 7474822 7486726 11414798 11427544 11441751 100527971 100527966 100527965 102583064 102588079 102591513 107830898 107778080 107775627 4351432 4340580 4349716 103637824 109942375 100285745 123086397 123145506 123149334 123409789 123412647 123448210 8085610 8057886 110434954 100838836 100842832 100837998
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