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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT1G77405   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100784365   pentatricopeptide repeat-containing protein At1g77405 
 vvi-u.5   100261059   pentatricopeptide repeat-containing protein At1g77405 
 mtr-u.5   11429976   pentatricopeptide repeat-containing protein At1g77405 
 sly-u.5   101266052   pentatricopeptide repeat-containing protein At1g77405 
 osa-u.5   4334028   pentatricopeptide repeat-containing protein At1g77405 
 zma-u.5   100383443   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to AT1G77405 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G77405 (ath-m.9 coexpression data)

CoexMap"844077"


athAT1G77405 | Entrez gene ID : 844077      
Species ath gma vvi mtr sly osa zma ppo hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 6 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_177865.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for NP_177865.2)
Subcellular
localization
TargetP
chlo 2  (predict for NP_177865.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G77405

.
ath-m.4.bio
for
AT1G77405

.
ath-m.4.hor
for
AT1G77405

.
ath-m.4.lig
for
AT1G77405

.
ath-m.4.str
for
AT1G77405

.
ath-m.4.tis
for
AT1G77405

.
gma-u.5
for
100784365

.
vvi-u.5
for
100261059

.
mtr-u.5
for
11429976

.
sly-u.5
for
101266052

.
osa-u.5
for
4334028

.
zma-u.5
for
100383443

.


Ortholog ID: 7097
Species gma sly osa zma bra vvi mtr ghi ghi bna sbi sot sot cit bdi nta nta
Symbol LOC100784365 LOC101266052 LOC4334028 LOC100383443 LOC103867333 LOC100261059 LOC11429976 LOC107901387 LOC121218259 LOC106432395 LOC8085977 LOC102605091 LOC107059032 LOC102615478 LOC100837428 LOC107760688 LOC107783613
Function* pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405-like pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100784365 101266052 4334028 100383443 103867333 100261059 11429976 107901387 121218259 106432395 8085977 102605091 107059032 102615478 100837428 107760688 107783613
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