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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  9269267  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-r.6  9269267  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-e.1  9269267  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-u.5  107281139  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 sly-u.5  101257473  pentatricopeptide repeat-containing protein 
 vvi-u.5  100852670  pentatricopeptide repeat-containing protein At4g13650 
 ppo-u.5  7468624  pentatricopeptide repeat-containing protein At4g13650 

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Top 50 coexpressed genes to 9269267 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 9269267 (osa-u.5 coexpression data)

CoexMap"9269267"


osaLOC9269267 | Entrez gene ID : 9269267
Species osa sly vvi ppo tae mtr hvu ath zma ghi bdi cit gma bra cre sbi bna nta sot
Paralog 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_066168905.1 [sequence] [blastp]
XP_066168906.1 [sequence] [blastp]
XP_066168907.1 [sequence] [blastp]
XP_066168908.1 [sequence] [blastp]
XP_066168909.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  mito 2,  chlo_mito 2,  cyto_E.R. 2,  nucl 1,  E.R. 1,  cyto_pero 1  (predict for XP_066168905.1)
cyto 3,  mito 2,  chlo_mito 2,  cyto_E.R. 2,  nucl 1,  E.R. 1,  cyto_pero 1  (predict for XP_066168906.1)
cyto 3,  mito 2,  chlo_mito 2,  cyto_E.R. 2,  nucl 1,  E.R. 1,  cyto_pero 1  (predict for XP_066168907.1)
cyto 3,  mito 2,  chlo_mito 2,  cyto_E.R. 2,  nucl 1,  E.R. 1,  cyto_pero 1  (predict for XP_066168908.1)
cyto 3,  mito 2,  chlo_mito 2,  cyto_E.R. 2,  nucl 1,  E.R. 1,  cyto_pero 1  (predict for XP_066168909.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_066168905.1)
mito 6,  other 3  (predict for XP_066168906.1)
mito 6,  other 3  (predict for XP_066168907.1)
mito 6,  other 3  (predict for XP_066168908.1)
mito 6,  other 3  (predict for XP_066168909.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
9269267

.

osa-r.6
for
9269267

.

osa-e.1
for
9269267

.

osa-u.5
for
107281139

.

sly-u.5
for
101257473

.

vvi-u.5
for
100852670

.

ppo-u.5
for
7468624

.


Ortholog ID: 14874
Species sly osa osa vvi ppo hvu sot
Symbol LOC101257473 LOC9269267 LOC107281139 LOC100852670 LOC7468624 LOC123445665 LOC107062875
Function* pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257473 9269267 107281139 100852670 7468624 123445665 107062875
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